ggKbase | organisms

Consensus taxonomy: Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Curated version: solids_Flavobacteriales_1

Properties

Avg. coverage: 3.98 Longest contig: 8.96 Kbp Bin length: 1.35 Mbp GC content: 39.55 %

Contigs count: 814 Features count: 1745 rRNAs count: 0 tRNAs count: 8

Genome completeness

partial RP 15 / 55 BSCG 13 / 51 ASCG 2 / 38

Displaying items 351-400 of 814 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_25622 Species: R_Fluviicola_43_260 (50%)	2	1478 bp	44.25	4.06	102.10
scnpilot_solids1_trim150_scaffold_14991 Species: Flavobacterium sp. F52 (50%)	2	2163 bp	37.40	3.12	59.92
scnpilot_solids1_trim150_scaffold_23848 Species: Flavobacterium frigoris (50%)	2	1554 bp	36.87	4.44	99.23
scnpilot_solids1_trim150_scaffold_31896 Species: R_Fluviicola_43_260 (50%)	2	1260 bp	40.95	4.29	94.05
scnpilot_solids1_trim150_scaffold_21928 Species: Flavobacterium sp. AED (50%)	2	1651 bp	41.37	4.45	97.58
scnpilot_solids1_trim150_scaffold_29177 Species: Fluviicola taffensis (50%)	2	1344 bp	37.43	2.79	98.88
scnpilot_solids1_trim150_scaffold_29946 Species: Flavobacterium sp. 316 (50%)	2	1319 bp	34.72	3.75	79.61
scnpilot_solids1_trim150_scaffold_32803 Species: Elizabethkingia meningoseptica (50%)	2	1234 bp	33.23	4.50	60.53
scnpilot_solids1_trim150_scaffold_29179 Species: Elizabethkingia meningoseptica (50%)	2	1343 bp	39.54	3.80	98.29
scnpilot_solids1_trim150_scaffold_43516 Species: R_Fluviicola_43_260 (50%)	2	1003 bp	40.18	3.59	102.89
scnpilot_solids1_trim150_scaffold_16916 Species: Chryseobacterium sp. JM1 (50%)	2	1980 bp	35.71	2.58	82.27
scnpilot_solids1_trim150_scaffold_36869 Species: Flavobacterium rivuli (50%)	2	1134 bp	53.53	3.17	93.92
scnpilot_solids1_trim150_scaffold_41654 Species: Chryseobacterium sp. P1-3 (50%)	2	1035 bp	37.87	3.04	73.33
scnpilot_solids1_trim150_scaffold_13831 Species: Chryseobacterium sp. StRB126 (50%)	2	2289 bp	38.93	3.15	77.46
scnpilot_solids1_trim150_scaffold_23600 Species: Formosa sp. AK20 (50%)	2	1568 bp	45.79	3.25	94.13
scnpilot_solids1_trim150_scaffold_36360 Species: Chryseobacterium solincola (50%)	2	1146 bp	35.51	4.19	98.43
scnpilot_solids1_trim150_scaffold_13577 Species: Riemerella anatipestifer (50%)	2	2319 bp	39.97	5.05	83.05
scnpilot_solids1_trim150_scaffold_41145 Species: Elizabethkingia miricola (100%)	2	1045 bp	33.88	4.31	80.96
scnpilot_solids1_trim150_scaffold_38538 Species: Fluviicola taffensis (100%)	2	1098 bp	39.44	1.91	92.90
scnpilot_solids1_trim150_scaffold_15754 Species: Flavobacteria bacterium BAL38 (50%)	2	2085 bp	46.09	3.17	90.22
scnpilot_solids1_trim150_scaffold_21939 Species: Mangrovimonas yunxiaonensis (50%)	2	1650 bp	43.52	2.55	96.55
scnpilot_solids1_trim150_scaffold_23348 Species: Fluviicola taffensis (50%)	2	1579 bp	42.94	2.18	98.04
scnpilot_solids1_trim150_scaffold_31140 Species: Elizabethkingia meningoseptica (50%)	2	1282 bp	36.27	2.81	99.92
scnpilot_solids1_trim150_scaffold_42974 Species: Chryseobacterium formosense (50%)	2	1012 bp	40.12	2.96	91.90
scnpilot_solids1_trim150_scaffold_22846 Species: R_Fluviicola_43_260 (50%)	2	1604 bp	36.91	2.90	76.12
scnpilot_solids1_trim150_scaffold_26087 Species: Chryseobacterium sp. JM1 (50%)	2	1458 bp	36.42	4.42	98.35
scnpilot_solids1_trim150_scaffold_23607 Species: Flavobacterium psychrophilum (50%)	2	1568 bp	37.12	2.77	95.47
scnpilot_solids1_trim150_scaffold_19375 Species: Cellulophaga geojensis (50%)	2	1799 bp	38.13	4.25	72.37
scnpilot_solids1_trim150_scaffold_35232 Species: Chryseobacterium indologenes (50%)	2	1172 bp	38.48	4.74	92.66
scnpilot_solids1_trim150_scaffold_12624 Species: Bergeyella zoohelcum (50%)	2	2441 bp	34.78	4.30	74.23
scnpilot_solids1_trim150_scaffold_19120 Species: Flavobacterium suncheonense (50%)	2	1817 bp	43.20	3.63	79.75
scnpilot_solids1_trim150_scaffold_31912 Species: Flavobacteriaceae bacterium 3519-10 (50%)	2	1259 bp	39.24	3.81	86.02
scnpilot_solids1_trim150_scaffold_41665 Species: Fluviicola taffensis (50%)	2	1035 bp	37.00	2.90	90.72
scnpilot_solids1_trim150_scaffold_18298 Species: Flavobacterium sp. 316 (50%)	2	1873 bp	48.00	3.92	96.74
scnpilot_solids1_trim150_scaffold_43531 Species: Flavobacterium sp. MEB061 (50%)	2	1003 bp	52.64	2.99	86.14
scnpilot_solids1_trim150_scaffold_38803 Species: Joostella marina (50%)	2	1092 bp	37.27	2.88	99.73
scnpilot_solids1_trim150_scaffold_35748 Species: Fluviicola taffensis (50%)	2	1159 bp	34.60	3.49	83.35
scnpilot_solids1_trim150_scaffold_28532 Species: Flavobacteriaceae bacterium 3519-10 (50%)	2	1364 bp	38.27	2.86	50.37
scnpilot_solids1_trim150_scaffold_42725 Species: R_Fluviicola_43_260 (50%)	2	1017 bp	38.74	2.65	78.17
scnpilot_solids1_trim150_scaffold_30229 Species: Chryseobacterium gleum (50%)	2	1310 bp	35.11	3.44	95.95
scnpilot_solids1_trim150_scaffold_106748 Species: Elizabethkingia miricola (50%)	2	1036 bp	30.69	2.75	29.83
scnpilot_solids1_trim150_scaffold_16166 Species: Elizabethkingia miricola (50%)	2	2044 bp	37.23	3.01	86.30
scnpilot_solids1_trim150_scaffold_38294 Species: Fluviicola taffensis (100%)	2	1929 bp	37.90	2.57	47.59
scnpilot_solids1_trim150_scaffold_33110 Species: Flavobacterium sp. F52 (50%)	2	1225 bp	48.08	3.43	100.16
scnpilot_solids1_trim150_scaffold_17350 Species: Owenweeksia hongkongensis (50%)	2	1945 bp	36.86	5.32	94.86
scnpilot_solids1_trim150_scaffold_43023 Species: Fluviicola taffensis (50%)	2	1011 bp	40.95	2.82	96.14
scnpilot_solids1_trim150_scaffold_34031 Species: Chryseobacterium piperi (100%)	2	1202 bp	39.60	2.25	92.60
scnpilot_solids1_trim150_scaffold_27264 Species: RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated (50%)	2	1411 bp	36.36	3.83	99.29
scnpilot_solids1_trim150_scaffold_38552 Species: Chryseobacterium soli (50%)	2	1097 bp	37.65	3.97	92.98
scnpilot_solids1_trim150_scaffold_41672 Species: Flavobacteriales bacterium BRH_c54 (100%)	2	1035 bp	38.65	4.06	54.78

Displaying items 351-400 of 814 in total

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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