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SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

In projects: SCNPILOT_SOLID_1_TRIM150

Consensus taxonomy: Flavobacteriales  →  Flavobacteriia  →  Bacteroidetes  →  Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Curated version: solids_Flavobacteriales_1

Properties

Avg. coverage: 3.98 Longest contig: 8.96 Kbp Bin length: 1.35 Mbp GC content: 39.55 %
Contigs count: 814 Features count: 1745 rRNAs count: 0 tRNAs count: 8

Genome completeness

partial RP 15 / 55 BSCG 13 / 51 ASCG 2 / 38
Displaying items 401-450 of 814 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_solids1_trim150_scaffold_43282
Species: Riemerella anatipestifer (50%)
2 1007 bp 51.64 3.87 97.12
scnpilot_solids1_trim150_scaffold_39787
Species: Fluviicola taffensis (50%)
2 1071 bp 41.08 3.36 89.64
scnpilot_solids1_trim150_scaffold_38811
Species: BJP_08E140C01_Flavobacteriales_35_8 (50%)
2 1092 bp 39.10 2.47 78.57
scnpilot_solids1_trim150_scaffold_43540
Species: Fluviicola taffensis (50%)
2 1003 bp 39.28 2.09 92.42
scnpilot_solids1_trim150_scaffold_29972
Species: Flavobacterium enshiense (50%)
2 1318 bp 39.76 2.73 95.83
scnpilot_solids1_trim150_scaffold_15260
Species: Flavobacterium sp. CF136 (50%)
2 2132 bp 42.26 4.92 89.92
scnpilot_solids1_trim150_scaffold_19645
Species: Fluviicola taffensis (100%)
2 1782 bp 40.74 3.45 76.60
scnpilot_solids1_trim150_scaffold_33630
Species: Flavobacteria bacterium BAL38 (50%)
2 1212 bp 39.27 5.45 97.77
scnpilot_solids1_trim150_scaffold_26359
Species: R_Fluviicola_43_260 (50%)
2 1447 bp 39.81 4.56 76.92
scnpilot_solids1_trim150_scaffold_21447
Species: Flavobacterium sp. AED (50%)
2 1675 bp 42.21 5.19 71.10
scnpilot_solids1_trim150_scaffold_31672
Species: Flavobacterium hibernum (50%)
2 1266 bp 41.94 3.32 95.50
scnpilot_solids1_trim150_scaffold_38048
Species: Owenweeksia hongkongensis (50%)
2 1107 bp 37.58 3.39 99.46
scnpilot_solids1_trim150_scaffold_27273
Species: Flavobacterium sp. AED (50%)
2 1411 bp 37.56 3.40 87.17
scnpilot_solids1_trim150_scaffold_33889
Species: Chryseobacterium luteum (50%)
2 1206 bp 35.57 3.23 99.25
scnpilot_solids1_trim150_scaffold_23627
Species: Capnocytophaga sp. oral taxon 329 (50%)
2 1566 bp 35.70 3.07 99.81
scnpilot_solids1_trim150_scaffold_29467
Species: Flavobacterium sp. KMS (50%)
2 1335 bp 35.06 3.93 86.52
scnpilot_solids1_trim150_scaffold_30755
Species: Aequorivita sublithincola (50%)
2 1295 bp 39.69 3.01 87.80
scnpilot_solids1_trim150_scaffold_9956
Species: Flavobacterium subsaxonicum (50%)
2 3513 bp 39.00 3.76 89.24
scnpilot_solids1_trim150_scaffold_39540
Species: Flavobacterium hydatis (50%)
2 1077 bp 42.90 5.15 96.94
scnpilot_solids1_trim150_scaffold_25148
Species: Fluviicola taffensis (100%)
2 1496 bp 34.96 3.11 99.47
scnpilot_solids1_trim150_scaffold_15012
Species: BJP_08E140C01_Flavobacteriales_35_8 (50%)
2 2161 bp 40.63 4.72 96.76
scnpilot_solids1_trim150_scaffold_17877
Species: Flavobacterium rivuli (50%)
2 1904 bp 36.24 4.96 62.55
scnpilot_solids1_trim150_scaffold_16182
Species: R_Fluviicola_43_260 (50%)
2 2043 bp 38.03 3.38 82.53
scnpilot_solids1_trim150_scaffold_15272
Species: Bergeyella zoohelcum (50%)
2 2131 bp 41.25 3.24 99.11
scnpilot_solids1_trim150_scaffold_30761
Species: Elizabethkingia meningoseptica (50%)
2 1294 bp 40.96 4.87 88.33
scnpilot_solids1_trim150_scaffold_37538
Species: Flavobacterium sp. 316 (50%)
2 1119 bp 34.94 3.49 84.72
scnpilot_solids1_trim150_scaffold_7850
Species: Flavobacterium limnosediminis (50%)
2 3447 bp 41.83 4.26 64.49
scnpilot_solids1_trim150_scaffold_12396
Species: Elizabethkingia anophelis (50%)
2 2479 bp 40.10 5.14 88.34
scnpilot_solids1_trim150_scaffold_29732
Species: Capnocytophaga sputigena (50%)
2 1326 bp 30.54 3.17 91.86
scnpilot_solids1_trim150_scaffold_40725
Species: Flavobacterium limnosediminis (50%)
2 1053 bp 39.70 2.56 86.04
scnpilot_solids1_trim150_scaffold_20789
Species: Flavobacterium branchiophilum (50%)
2 1714 bp 34.07 4.03 100.12
scnpilot_solids1_trim150_scaffold_25413
Species: Nonlabens ulvanivorans (50%)
2 1486 bp 44.41 3.13 96.30
scnpilot_solids1_trim150_scaffold_25414
Species: Chryseobacterium gleum (100%)
2 1486 bp 43.07 8.48 61.17
scnpilot_solids1_trim150_scaffold_41695
Species: Elizabethkingia sp. BM10 (50%)
2 1034 bp 35.30 2.61 66.44
scnpilot_solids1_trim150_scaffold_34568
Species: Chryseobacterium soli (50%)
2 1189 bp 40.45 3.66 100.93
scnpilot_solids1_trim150_scaffold_31944
Species: Chryseobacterium sp. JM1 (50%)
2 1258 bp 36.88 3.46 98.97
scnpilot_solids1_trim150_scaffold_29736
Species: Fluviicola taffensis (100%)
2 1326 bp 37.78 2.49 87.56
scnpilot_solids1_trim150_scaffold_37545
Species: Flavobacterium johnsoniae (50%)
2 1119 bp 44.06 4.56 90.35
scnpilot_solids1_trim150_scaffold_23641
Species: Cellulophaga geojensis (50%)
2 1565 bp 33.29 3.74 71.50
scnpilot_solids1_trim150_scaffold_37802
Species: Chryseobacterium jeonii (50%)
2 1113 bp 37.38 2.70 98.38
scnpilot_solids1_trim150_scaffold_26379
Species: R_Fluviicola_43_260 (100%)
2 1446 bp 38.38 3.53 99.79
scnpilot_solids1_trim150_scaffold_24219
Species: Epilithonimonas lactis (50%)
2 1536 bp 40.95 3.13 94.92
scnpilot_solids1_trim150_scaffold_24731
Species: Chryseobacterium sp. JM1 (100%)
2 1514 bp 35.14 3.57 97.89
scnpilot_solids1_trim150_scaffold_30003
Species: Zunongwangia profunda (50%)
2 1317 bp 39.03 2.28 98.86
scnpilot_solids1_trim150_scaffold_25676
Species: Elizabethkingia miricola (100%)
2 1475 bp 38.58 4.47 99.05
scnpilot_solids1_trim150_scaffold_30260
Species: R_Fluviicola_43_260 (100%)
2 1310 bp 43.59 3.21 93.89
scnpilot_solids1_trim150_scaffold_39813
Species: Chryseobacterium formosense (50%)
2 1071 bp 44.82 3.36 96.36
scnpilot_solids1_trim150_scaffold_21981
Species: R_Fluviicola_43_260 (50%)
2 1648 bp 37.68 3.55 87.56
scnpilot_solids1_trim150_scaffold_43055
Species: Myroides odoratimimus (50%)
2 1011 bp 36.50 2.97 93.18
scnpilot_solids1_trim150_scaffold_15799
Species: Flavobacterium beibuense (50%)
2 2081 bp 39.79 2.52 90.39
Displaying items 401-450 of 814 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.