ggKbase | organisms

Consensus taxonomy: Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Manually curated genome
Original version: SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Properties

Avg. coverage: 1.00 Longest contig: 8.95 Kbp Bin length: 1.31 Mbp GC content: 39.03 %

Contigs count: 814 Features count: 1669 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38

Displaying items 751-800 of 814 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_34235_curated Species: Flavobacterium hydatis (50%)	2	1046 bp	45.79	1.00	99.24
scnpilot_solids1_trim150_scaffold_29467_curated Species: Flavobacterium sp. KMS (50%)	2	1243 bp	35.56	1.00	93.40
scnpilot_solids1_trim150_scaffold_34568_curated Species: Chryseobacterium soli (50%)	2	1186 bp	40.47	1.00	100.93
scnpilot_solids1_trim150_scaffold_33496_curated Species: Fluviicola taffensis (100%)	1	1213 bp	39.16	1.00	99.92
scnpilot_solids1_trim150_scaffold_39689_curated Species: Flavobacterium sp. AED (50%)	2	1071 bp	43.04	1.00	93.84
scnpilot_solids1_trim150_scaffold_39787_curated Species: Fluviicola taffensis (50%)	2	984 bp	39.94	1.00	88.72
scnpilot_solids1_trim150_scaffold_31229_curated Species: Elizabethkingia meningoseptica (50%)	2	1276 bp	34.72	1.00	94.98
scnpilot_solids1_trim150_scaffold_31679_curated Species: R_Fluviicola_43_260 (100%)	1	1263 bp	36.26	1.00	73.87
scnpilot_solids1_trim150_scaffold_15852_curated Species: Chryseobacterium formosense (100%)	1	2057 bp	37.68	1.00	99.90
scnpilot_solids1_trim150_scaffold_31345_curated Species: Flavobacterium sp. EM1321 (100%)	1	957 bp	38.45	1.00	29.78
scnpilot_solids1_trim150_scaffold_31672_curated Species: Flavobacterium hibernum (50%)	2	1263 bp	40.78	1.00	95.49
scnpilot_solids1_trim150_scaffold_36360_curated Species: Chryseobacterium solincola (50%)	2	1047 bp	35.82	1.00	98.28
scnpilot_solids1_trim150_scaffold_15306_curated Species: Chryseobacterium sp. P1-3 (100%)	1	2126 bp	39.32	1.00	99.91
scnpilot_solids1_trim150_scaffold_14299_curated Species: R_Fluviicola_43_260 (50%)	2	2235 bp	35.70	1.00	85.64
scnpilot_solids1_trim150_scaffold_32685_curated Species: Fluviicola taffensis (50%)	2	1234 bp	40.52	1.00	84.60
scnpilot_solids1_trim150_scaffold_41049_curated Species: Zunongwangia profunda (100%)	1	1033 bp	48.79	1.00	99.90
scnpilot_solids1_trim150_scaffold_11937_curated Species: R_Fluviicola_43_260 (100%)	1	2463 bp	39.34	1.00	100.00
scnpilot_solids1_trim150_scaffold_35964_curated Species: R_Fluviicola_43_260 (66.67%)	3	1019 bp	39.94	1.00	96.27
scnpilot_solids1_trim150_scaffold_38527_curated Order: Flavobacteriales (66.67%)	3	1095 bp	39.18	1.00	99.45
scnpilot_solids1_trim150_scaffold_39209_curated Species: Joostella marina (100%)	1	1092 bp	38.28	1.00	99.73
scnpilot_solids1_trim150_scaffold_27273_curated Species: Flavobacterium sp. AED (50%)	2	1419 bp	37.49	1.00	87.10
scnpilot_solids1_trim150_scaffold_38048_curated Species: Owenweeksia hongkongensis (50%)	2	1104 bp	36.32	1.00	100.00
scnpilot_solids1_trim150_scaffold_9771_curated Order: Flavobacteriales (75%)	4	2786 bp	34.85	1.00	83.67
scnpilot_solids1_trim150_scaffold_28080_curated Species: GWF2_Bacteroidetes_35_48_curated (50%)	2	1312 bp	39.48	1.00	93.29
scnpilot_solids1_trim150_scaffold_37608_curated Species: Flavobacteriaceae bacterium 3519-10 (50%)	2	1114 bp	42.19	1.00	99.37
scnpilot_solids1_trim150_scaffold_28894_curated Species: Chryseobacterium jeonii (50%)	2	1349 bp	36.25	1.00	90.51
scnpilot_solids1_trim150_scaffold_31121_curated Species: Flavobacterium sp. EM1308 (100%)	1	1280 bp	46.33	1.00	99.84
scnpilot_solids1_trim150_scaffold_27693_curated Species: Elizabethkingia meningoseptica (50%)	2	1392 bp	42.03	1.00	98.28
scnpilot_solids1_trim150_scaffold_33744_curated Species: Chryseobacterium formosense (50%)	2	1206 bp	38.47	1.00	100.00
scnpilot_solids1_trim150_scaffold_33630_curated Species: Flavobacteria bacterium BAL38 (50%)	2	1209 bp	39.29	1.00	97.77
scnpilot_solids1_trim150_scaffold_13442_curated Species: Elizabethkingia anophelis (50%)	2	2271 bp	36.24	1.00	99.34
scnpilot_solids1_trim150_scaffold_11832_curated Species: Phaeodactylibacter xiamenensis (50%)	2	2521 bp	37.68	1.00	85.20
scnpilot_solids1_trim150_scaffold_38258_curated Species: R_Fluviicola_43_260 (50%)	2	1024 bp	35.55	1.00	80.27
scnpilot_solids1_trim150_scaffold_15012_curated Species: BJP_08E140C01_Flavobacteriales_35_8 (50%)	2	2105 bp	40.86	1.00	98.48
scnpilot_solids1_trim150_scaffold_29331_curated Species: R_Fluviicola_43_260 (50%)	2	1336 bp	45.13	1.00	99.48
scnpilot_solids1_trim150_scaffold_18741_curated Order: Flavobacteriales (66.67%)	3	1838 bp	36.13	1.00	97.61
scnpilot_solids1_trim150_scaffold_10560_curated Species: Flavobacterium frigoris (50%)	2	2764 bp	35.46	1.00	90.63
scnpilot_solids1_trim150_scaffold_21833_curated Phylum: Bacteroidetes (66.67%)	3	1342 bp	38.23	1.00	94.56
scnpilot_solids1_trim150_scaffold_11951_curated Species: Flavobacteriales bacterium BRH_c54 (100%)	2	2425 bp	37.40	1.00	93.15
scnpilot_solids1_trim150_scaffold_26418_curated Species: Capnocytophaga canimorsus (100%)	1	1442 bp	40.85	1.00	71.78
scnpilot_solids1_trim150_scaffold_27546_curated Species: Flavobacterium frigoris (100%)	1	1397 bp	36.29	1.00	99.86
scnpilot_solids1_trim150_scaffold_34228_curated Species: Flavobacterium sp. CF136 (50%)	2	1194 bp	44.97	1.00	100.25
scnpilot_solids1_trim150_scaffold_37230_curated Species: Cyclobacteriaceae bacterium AK24 (50%)	2	1073 bp	36.91	1.00	93.38
scnpilot_solids1_trim150_scaffold_43516_curated Species: R_Fluviicola_43_260 (50%)	2	996 bp	40.06	1.00	103.01
scnpilot_solids1_trim150_scaffold_27370_curated Species: CG_Flavo_02 (100%)	1	1343 bp	39.09	1.00	99.85
scnpilot_solids1_trim150_scaffold_42964_curated Species: R_Fluviicola_43_260 (100%)	1	1009 bp	34.89	1.00	95.74
scnpilot_solids1_trim150_scaffold_41672_curated Species: Flavobacteriales bacterium BRH_c54 (100%)	2	1032 bp	38.47	1.00	54.94
scnpilot_solids1_trim150_scaffold_12556_curated Species: Flavobacterium sp. AED (100%)	1	2417 bp	41.75	1.00	76.33
scnpilot_solids1_trim150_scaffold_43131_curated Species: Chryseobacterium solincola (100%)	1	1006 bp	37.28	1.00	31.31
scnpilot_solids1_trim150_scaffold_5880_curated Order: Flavobacteriales (75%)	4	5406 bp	36.64	1.00	75.08

Displaying items 751-800 of 814 in total

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

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