name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_planktonic_scaffold_66144_1
unknown
|
Not on your lists |
comp(3..80)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_66144_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
197..1213
|
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Quinolinate synthase A n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIB7_9BACT
quinolinate synthetase complex subunit A
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(1303..2403)
|
Phosphate transporter n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIB1_9BACT
Phosphate transporter {ECO:0000313|EMBL:EEF60372.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
inorganic phosphate transporter
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(2409..3038)
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIB0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60371.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
pit accessory protein
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_5
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3247..4581
|
Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RUR2_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EEB79627.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_6
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
4651..5739
|
Phosphate-binding protein PstS n=2 Tax=Geobacter metallireducens RepID=Q39S55_GEOMG
phosphate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_7
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
5944..6822
|
Phosphate ABC transporter, inner membrane subunit PstC n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZV18_MELRP
phosphate ABC transporter, inner membrane subunit PstC
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_8
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
6932..8059
|
Phosphate transport system permease protein PstA n=1 Tax=uncultured bacterium F25-01 RepID=I3VIG0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJS47753.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_9
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria
|
Not on your lists |
8079..8885
|
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
ABC-type phosphate transport system, ATPase component n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DYS7_METI4
pstB; phosphate ABC transporter ATPase
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
8917..9594
|
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLG7_9BACT
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
phosphate uptake regulator PhoU
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_11
unknown
|
Not on your lists |
9981..10070
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_66144_12
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10080..11792
|
Potassium-transporting ATPase A chain n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4T4_DESTA
K+-transporting ATPase, KdpA
Tax=RBG_16_Deltaproteobacteria_64_85_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_13
uncultured bacterium, Bacteria
|
Not on your lists |
11792..13804
|
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
potassium-transporting ATPase subunit B n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744732
K+-transporting ATPase, B subunit
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
13919..14503
|
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Potassium-transporting ATPase C chain n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSQ4_9BACT
K+-transporting ATPase, C subunit
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
14680..15126
|
Transcriptional regulator, MarR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCJ7_9BACT
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDY15832.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
MarR family transcriptional regulator
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
15174..15989
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFR4_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EEF61428.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
short chain dehydrogenase
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_17
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15994..17337
|
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PPG4_9CYAN
flavodoxin reductase family 1
Flavodoxin reductase family 1 {ECO:0000313|EMBL:BAO83841.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_18
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria
|
Not on your lists |
17439..20114
|
Osmosensitive K+ channel signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSQ3_9BACT
kdpD; Osmosensitive K+ channel histidine kinase KdpD
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_19
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria
|
Not on your lists |
20111..20797
|
Two component transcriptional regulator, winged helix family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSQ2_9BACT
chemotaxis protein CheY
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_20
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(20846..22204)
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAT6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63121.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_21
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria
|
Not on your lists |
comp(22386..24605)
|
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000368FE92
alpha-1,2-mannosidase
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_22
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria
|
Not on your lists |
25108..27867
|
Beta-glucosidase (EC:3.2.1.21)
Beta-glucosidase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZN48_OPITP
Tax=RBG_13_Planctomycetes_62_9_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_23
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
27882..29579
|
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAT7_9BACT
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:EEF63122.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
histidine kinase
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_24
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
29637..30269
|
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAT8_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF63123.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
LuxR family transcriptional regulator
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_25
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
30423..33410
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAT9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63124.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_26
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
33485..34363
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAU0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63125.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria
|
Not on your lists |
comp(34500..34832)
|
putative pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL35_9BACT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_28
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
35033..37933
|
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:EEF58764.1}; EC=1.2.4.2 {ECO:0000313|EMBL:EEF58764.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMW8_9BACT
2-oxoglutarate dehydrogenase, E1 subunit
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_29
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria
|
Not on your lists |
37952..39187
|
2-oxoglutarate dehydrogenase E2 (EC:2.3.1.61)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NR09_MARHT
|
|
berkeley_reactor_200306_planktonic_scaffold_66144_30
Paenibacillus curdlanolyticus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(39419..43828)
|
S-layer domain protein n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I873_9BACL
S-layer domain protein {ECO:0000313|EMBL:EFM11378.1}; TaxID=717606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus curdlanolyticus YK9.;"
carbohydrate binding family 6
|