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berkeley_reactor_200306_planktonic_scaffold_23420_202

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 248142..249347

Top 3 Functional Annotations

Value Algorithm Source
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 401.0
  • Bit_score: 610
  • Evalue 1.20e-171
succinyl-CoA synthetase subunit beta (EC:6.2.1.5) similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 400.0
  • Bit_score: 493
  • Evalue 3.20e-137
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XII3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 401.0
  • Bit_score: 610
  • Evalue 8.20e-172

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1206
ATGAATATTCACGAATATCAGGCCAAGCAGTTGCTCGCCAAATGCGGCGTCGCCGTTCCGCTCGAAATCCCCGCCAAATCGCTCGCCGAAGTCCGCCCGGCGGCCGAAAAAATCGTCGCCAGCGGCAGCGCCAAGGTCGTGGTGAAATCCCAGATTCACGCCGGCGGCCGCGGCAAGGGCACGTTCAAAAGCGGTTTCCAGGGCGGCGTCAAAGTGACTTCTTCCGTGGACGAAGCCGTCAGCGTTGCCGAAAAAATGCTCGGCCAGGTGCTCGTTACCAAGCAAACCGGCGCGGAAGGTCGGCAGGTGCAAACGCTGCTGCTCGCCGCCGGCGCCAAGATTAAAAAGGAATTTTACCTCGCCGTGTTGTTGGACCGGAACAATTCCCGTCCCCTCATCATGGCCAGCACCGAAGGCGGCATGGATATCGAGGAAGTTGCCGAAAAATTTCCCGACAAGATTTTCAAGGAACACATTGATCCGGCAGTCGGGATCATGCCGTATCAGGCGCGTAAAATCGCTTCGGCGCTCGGCCTGAAAGGAGATTTGTTCAACGCCGGCGTCAAATTGATCACCGGCGTTTACAACAGTTGGTGGGAATTTGACGCGTCCATGGTGGAATTGAATCCGCTGGCCGTCGTGGAACTGGCCGATGGCAAGGAAACCGTGATGGCGCTCGATGCCAAAGTGTCCTTGGATGACAACGCGCTCTATCGTCACAAGGACATCCAGGAAATGCGCGACCTGAACGAGGAAGCGCCGCTGGAAATCGAGGCCAGCAAGTTCAACCTCAACTACATCAAGCTCGACGGCAGCATCGCCTGTCTCGTCAACGGCGCCGGCTTGGCGATGGCCACGATGGACATCATCCAGCATTTCGGCGGCAGCCCGGCGAACTTCCTCGACGTCGGCGGCGGCGCGAGCAAGGAGCAGGTGACCGCCGCGTTCAAGATCATCCTGAGCGATCCGAATGTGAAAGGCATTTTGGTGAATATTTTCGGCGGCATCATGGATTGCAACGTCATCGCCACCGGCATCGTTGCGGCGGTGAAGGAAACCGGTTTGAAACTGCCGCTCGTAGTCCGCCTCGAAGGCAACAACGTTGCCGCCGGCAAGAAGACACTGGCCGAATCCGGCGTGAGCATCATCACCGGCGATTCCATGGCGGATGCGGCGCAGAAGGTGGTGAAGGTCGTTGGTAAATAA
PROTEIN sequence
Length: 402
MNIHEYQAKQLLAKCGVAVPLEIPAKSLAEVRPAAEKIVASGSAKVVVKSQIHAGGRGKGTFKSGFQGGVKVTSSVDEAVSVAEKMLGQVLVTKQTGAEGRQVQTLLLAAGAKIKKEFYLAVLLDRNNSRPLIMASTEGGMDIEEVAEKFPDKIFKEHIDPAVGIMPYQARKIASALGLKGDLFNAGVKLITGVYNSWWEFDASMVELNPLAVVELADGKETVMALDAKVSLDDNALYRHKDIQEMRDLNEEAPLEIEASKFNLNYIKLDGSIACLVNGAGLAMATMDIIQHFGGSPANFLDVGGGASKEQVTAAFKIILSDPNVKGILVNIFGGIMDCNVIATGIVAAVKETGLKLPLVVRLEGNNVAAGKKTLAESGVSIITGDSMADAAQKVVKVVGK*