ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_23420_209

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(253423..254718)

Top 3 Functional Annotations

Value Algorithm Source
Citrate synthase id=2648435 bin=GWF2_Lentisphaerae_57_35 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 432.0
  • Bit_score: 642
  • Evalue 2.70e-181
cis2; hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 435.0
  • Bit_score: 549
  • Evalue 5.20e-154
Tax=GWF2_Verrucomicrobia_62_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 430.0
  • Bit_score: 652
  • Evalue 2.80e-184

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_Verrucomicrobia_62_7_curated → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1296
ATGAGTAAAGAAGCCAAACTGGAACTGGACGGAAACGTTTACACGCTGCCCACCCTCACCGGCAGTGAAAATGAAAAGGCGGTGGACATCACTTCATTGCGCGCGACCACCGGTTACATCACGATTGATGACGGTTACGGCAACACCGGTTCCTGCACCAGCAACATCACGTTCATTGACGGCGACAAGGGAATTCTGCGTTATCGCGGCATCCCCATCGAAGTGCTGGCGGAAAAATCCAATTTCATTGAAACCGCCTACCTCGTGATTTACGGAAGCCTGCCGACGCGGGCGCAGTTGAAGCGGTTCTCCAATCTGCTGACCGAGAACAGCTTTTTGCACGAGGACATGAAGTTTCATTTCGAGGGGTTTCCGACGGGCGCCCATCCGATGGCGATTCTCTCGGCCATGATCAACGCGGCGAGCTGCTTCGATGAGGATTTGATGAAATGGAAATGGGGCAAGAACAACCAGTTTGATGTGTATGCCGCGCGGTTGATTTCGCAGGTGCGGACGATTGCGGCGTATTCCTATCGCAAGTCGCACGGGCTGCCGATGATTTATCCGAAGCAGAGCTACAAATACACGGCGAATTTCCTGCATCTGCTGTTCTCGATGCCTTACGAGGATTTTGAATTGAAGCCGGAAGTGGTCAAGGCGCTCGACCTGATTTTCCTGCTGCACGCGGATCACGAACAAAATTGTTCCACCTCCACCGTCCGCATGGTGGCGTCCAGCCAGGCGAACCTGTTCGCCAGTTGCGCCGCCGGCGTCTGCGCGCTTTGGGGGCCGTTGCATGGCGGAGCCAACCAGGCCGTCCTGGAAATGCTCCAGCAAATCCATGACGAAGGCGACGACGGCTCCAAGTTTATCACCGCCGCCAAAGACAAGAACAGCGGCCGGAAACTCATGGGCTTCGGCCATCGCGTCTATAAGAATTTCGATCCGCGCGCGAAGATCATCAAAAAAGCCTGCGATGAAGTCCTGTCCAAACTGCACATCACTGACCCGTTGTTGGACATCGCCAAGAAACTGGAGGAAACGGCGTTGAAAGATTCCTACTTTGTTGAGCGCAAATTGTATCCCAACGTGGATTTTTACAGCGGCATTATCATGCGTGCGATTGGCATTCCGGTGGAAATGTTCACCGTAATTTTTGCCATCGGCCGCATGCCCGGCTGGATTGCGAATTACAAGGAAATCATGGACGAACCCAAGAGCCGCATTTATCGTCCGCGCCAGATTTACACGGGCAACACGGTCAGCCCGTATGTGCCGTTGGATGAGCGGAAGTAA
PROTEIN sequence
Length: 432
MSKEAKLELDGNVYTLPTLTGSENEKAVDITSLRATTGYITIDDGYGNTGSCTSNITFIDGDKGILRYRGIPIEVLAEKSNFIETAYLVIYGSLPTRAQLKRFSNLLTENSFLHEDMKFHFEGFPTGAHPMAILSAMINAASCFDEDLMKWKWGKNNQFDVYAARLISQVRTIAAYSYRKSHGLPMIYPKQSYKYTANFLHLLFSMPYEDFELKPEVVKALDLIFLLHADHEQNCSTSTVRMVASSQANLFASCAAGVCALWGPLHGGANQAVLEMLQQIHDEGDDGSKFITAAKDKNSGRKLMGFGHRVYKNFDPRAKIIKKACDEVLSKLHITDPLLDIAKKLEETALKDSYFVERKLYPNVDFYSGIIMRAIGIPVEMFTVIFAIGRMPGWIANYKEIMDEPKSRIYRPRQIYTGNTVSPYVPLDERK*