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berkeley_reactor_200306_planktonic_scaffold_23420_225

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(271710..272525)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00037EFBC4 similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 157.0
  • Bit_score: 198
  • Evalue 8.60e-48
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 159.0
  • Bit_score: 193
  • Evalue 7.80e-47
Uncharacterized protein {ECO:0000313|EMBL:CAY53567.1}; TaxID=216595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain SBW25).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 159.0
  • Bit_score: 193
  • Evalue 3.90e-46

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGTCATACTCAAGAGGCTTTCTGCTGGTTGCGATGCTGCTGCTGATATTCGGTGGTAGCAGCCCGCTCCGCGCCGCCTTGGATATGTTTTTGGATATTCCCGGTATTCCCGGAGAATCCGTGGATATAGTTCACAAAGATCAGATTGATGTGCTCGCTTGGGGTTGGGGAATGTCGAATCCCGGCACCGCCCAAGCCGGTGGTGGCGCCGGAGCTGGCAAGGCCAATTTTCAGGATCTCAGCGTAACCAAATATGTGGACAAGGCGAGTCCGCTGCTCATGGCAGACTGCGCCAAGGGCAGCCACGTTGATAAAGCCACTTTATTCGTTCGCAAAGCAGGCAAGGTGCCCATCGAATACATTAAGATCCAGCTTACAAATGTTTTGGTGAGGAGTGTTTCAACCGGCGGCTCCGGCGGCGAAGACCGGTTGACCGAAAATATCAGCTTGAATTTCGCACAGATGCAGATGGATTACGTCCCCACGAAACCAGATGGCAGCGCCGACCCGGCGGTTTCATTCAAGTGGGACATTGCCAGCAACTCCGGATCTGGAGGTGGCATCGGAACCGGAACAAGCCCGGCAGCCGGTCTGACCGCGACTATCAACTACACTAGCGGAGCCCCGGTGGCCAGATTGACGTGGATCAGTGTTGCGGGTGTGCATTACCAAGTCTGGGCCACCAGCGATTTGAGCGTCGCGTTCCAACCCTACGGCGGACCCATAGCTTCAGCCGGAGATGGAACCACTTCCGTCACCCTGCCCGCCGATGCCATCCGCATGTTCTTTCGGATCGAGACCATTTCAGGCCAGTAA
PROTEIN sequence
Length: 272
MSYSRGFLLVAMLLLIFGGSSPLRAALDMFLDIPGIPGESVDIVHKDQIDVLAWGWGMSNPGTAQAGGGAGAGKANFQDLSVTKYVDKASPLLMADCAKGSHVDKATLFVRKAGKVPIEYIKIQLTNVLVRSVSTGGSGGEDRLTENISLNFAQMQMDYVPTKPDGSADPAVSFKWDIASNSGSGGGIGTGTSPAAGLTATINYTSGAPVARLTWISVAGVHYQVWATSDLSVAFQPYGGPIASAGDGTTSVTLPADAIRMFFRIETISGQ*