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berkeley_reactor_200306_planktonic_scaffold_23420_234

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 280233..281015

Top 3 Functional Annotations

Value Algorithm Source
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 253.0
  • Bit_score: 354
  • Evalue 1.30e-94
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11) similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 257.0
  • Bit_score: 263
  • Evalue 4.50e-68
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGJ8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 253.0
  • Bit_score: 354
  • Evalue 9.00e-95

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 783
ATGAATTCTCCGAAAATTACCGTTGAAACGATACAGGACATGAAGGCGCGCGGCGAAAAAATCGCGGCGCTCACGGCCTATGACTATCCGATGGCAAAATTGCTGGATGAGGCGGGCATTCCCTTTCTCCTGGTCGGCGACTCGGTCGGCATGGTCGTGCTGGGCTATCCCGACACGACGCATGTGACGATGCCGGAGATGGAACATCATGTGCGCGCCGCCGCCCGGGCCAAACCGCGAGCGTTGCTGGGCGGCGACCTGCCGTTCAGGAGTTATGAAACCGCCGGGTCCGCGACGGCCAATGCGCGCCGGCTGGTGGCGGCCGGCGCGGAGTTTGTGAAGGCCGAGGGCGGAACCGAAATTTTGCCGCAGGTAAAAGCCATCGTCGCGGCCGGAATTCCGTTTTGCGGCCACTTGGGCATGTTGCCGCAGCATGTGTTGGAGGAGGGCGGTTACCACATCAAAGGCAAACGGGATGCGGAGCATCTGAAACTGTTGCAGGACGCCAAAGCGCTGGCGGAGGCGGGCGCTTTTGCCCTCGTGCTGGAACTGGTCACGCCGCCGGTCGCCCGGGAAATTTCCGAAGCCGTTGCCATTCCCACCATCGGCATCGGCAGCGGGCCGGACTGCGACGGGCAGATTTTGGTGACTCATGATTTGACCGGCAGTTTTCCGTGGTTCACGCCGCGTTTCGTGAAGCCGAGGGTGAATTGCGCGGCGGAGTTCAAGACGGCGGTGACCGGCTGGAAAGCTTCGGTTGAAACCTCCCGCGCGGCGCAATGA
PROTEIN sequence
Length: 261
MNSPKITVETIQDMKARGEKIAALTAYDYPMAKLLDEAGIPFLLVGDSVGMVVLGYPDTTHVTMPEMEHHVRAAARAKPRALLGGDLPFRSYETAGSATANARRLVAAGAEFVKAEGGTEILPQVKAIVAAGIPFCGHLGMLPQHVLEEGGYHIKGKRDAEHLKLLQDAKALAEAGAFALVLELVTPPVAREISEAVAIPTIGIGSGPDCDGQILVTHDLTGSFPWFTPRFVKPRVNCAAEFKTAVTGWKASVETSRAAQ*