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berkeley_reactor_200306_planktonic_scaffold_23420_252

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 301621..302475

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L2 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFM8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 284.0
  • Bit_score: 453
  • Evalue 9.10e-125
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 284.0
  • Bit_score: 453
  • Evalue 1.30e-124
rplB; 50S ribosomal protein L2 similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 284.0
  • Bit_score: 373
  • Evalue 4.40e-101

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 855
ATGCCCGTAAAAACATTTAGACCGCTGACGCCGTCTTTGCGATATATCACTGTCGCGGACTTCAGCGATATTACCAAGACCAAGCCGGAGAAGTCGCTGGTCGAAATTCGCAAGAAGACCGGTGGCCGCAACAATTACGGTCGCGTCACCGCCCGCGGCATTGGCGGCGGTCACAAGCAGAAAATCCGCCTCGTGGATTTCAAGCGCAATAAGCATGGCGTCGAGGCCACGGTGGCGGCGATTGAATATGATCCGATGCGCTCGGCCCGCCTGGCGCTGCTCCAATATAAGGACGGTGAAAAGCGTTATATCATCGCCCCGGTTGGCATCAAGGTGGGGGGCACGGTGTCCAGTGGTCCGACCGCTCCTCCGGAAATCGGCAACTCGCTGCCGTTGAAGTTGATTCCGATCAGCTCGGCGATTCACAACTTGGAATTGACTCCGGGCCGTGGCGGTCAGATTGTCCGTTCCGCTGGCGGCGCGGCGACGTTGATGTCCCGTGACGAAGGGTTTGCGCAGATTCGTCTGCCTTCCGGGGAAATCCGCAAGGTCAATGAAGAGTGCTATGCCACCATTGGCCAGGTGGGCAACACGGAGCATGAAAATGTGATTTTGGGCAAGGCGGGTCGCACGCGCCATCGCGGGTATCGCGGCATCACGCGCGGTGTGGCGCGCAACCCGGTGGATCACCCGAACGGTGGTGGTGCCGGTAAATCCAAGGGCGGTGGCGGCTGGCAGCAATTGATGTCGCCGTGGGGCAAGGTGGCCAAAGGTGGCCGCACCCGTGCCAAGTTTAAACAATCCAATCGTTTCATTGTGGTCCGTCGCAACGGATTGCCGGTTAAGACCAAGTAA
PROTEIN sequence
Length: 285
MPVKTFRPLTPSLRYITVADFSDITKTKPEKSLVEIRKKTGGRNNYGRVTARGIGGGHKQKIRLVDFKRNKHGVEATVAAIEYDPMRSARLALLQYKDGEKRYIIAPVGIKVGGTVSSGPTAPPEIGNSLPLKLIPISSAIHNLELTPGRGGQIVRSAGGAATLMSRDEGFAQIRLPSGEIRKVNEECYATIGQVGNTEHENVILGKAGRTRHRGYRGITRGVARNPVDHPNGGGAGKSKGGGGWQQLMSPWGKVAKGGRTRAKFKQSNRFIVVRRNGLPVKTK*