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berkeley_reactor_200306_planktonic_scaffold_64763_48

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(83449..84633)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB id=16796946 bin=RBG_16_Aminicenantes_66_30 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 35.0
  • Coverage: 374.0
  • Bit_score: 178
  • Evalue 7.90e-42
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 189.0
  • Bit_score: 167
  • Evalue 3.90e-39
Tax=GWF2_Elusimicrobia_62_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 35.0
  • Coverage: 323.0
  • Bit_score: 183
  • Evalue 4.50e-43

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Taxonomy

GWF2_Elusimicrobia_62_30_curated → Elusimicrobia → Bacteria

Sequences

DNA sequence
Length: 1185
ATGAAAAAATTATTCCTTTCCACGCGGCAACCGCGTTTTCAAAAAATCAATGGCGACGAGCATCGCGACGATGGCTTTCCCCTCATCCTGACCTTCTCCCGCAGGGAGAAGGAACAGCCGTTGGCAGCGATAAAACAACGCGAAAACTTTTCGAGCGGAATCCAGCCTGGCATTGGCGGGAAGCGGGGAACGTTTCTCCCTCTCCCCGAGGGAGAGGGCCGGGGTGAGGGAAAACCTCACGTTCAATCCCTCTGCGGCGTAATTGCCGGAATCGCTCTGCTGGCTGTCGTCGCGGGTTGCGGCCAGAAAACGGAACCGGCAAATACGCCAACGGACGCCGCGCCCGAAGCCGCTCGCGCCGCCAATCGGGTGACGCTCACGCCGGAAAATTTGCAGCACGTCGAGCTAAAAACCGAGCCGGCCCAACTGGGAAATCTCGGCATGACCGTCCGGGCCGCCGGCCGCCTCAGCGCCAATTTGAACAAAACCGCCCAGGTGACTTCCACCTTTGAAGGCCGCCTGGCGAAGTTGAATTTTGATGTCAACGACCGCGTGAAAGTCGGCGACGTGCTGGCGCTCGTGGAATCGCCCGAATTGCTCGGTCGTCAACTGGAGGTCAAGGCGCCGATGGACGGCGTCATCATCGAGCGCCACGCCACGACCGGCGAACTGGTGGACAAGGCCCGCAGCATTTACACCATCAGCGATCCTGCGGAACTCTGGGCCATCGCCGACATCAAGGAGCGCGACATCGCCGCCGTGAAGCCCGGTCAGGAAGCGGCGTTCACCGTGCTGGCGTATCCACACGAGCCGTTTCATGGCCGGGTGGTTTTGCTCGGCAACCAAGTGGAGCCGCAGACGCGCACGCTGGAGGCGCGCATTGTGGTGGCGAATCCCGAGGGAAAACTCAAACCCGGTATGTTCGCCGACGTGGAAATCACCACGACGATTCTCAATAACGTGCTGGTGATTCCCGACAGCGCCCTGCAAACGGATGGCAACGACGAAACGGTGTTCGTTGCGCTCGGCGAAAACCAGTTCGAGAAACGCGTGGTGAAACTCGGCGAGGAACATCAGGGCCGCGTGCAGATTCTCGACGGCTTGCAGGCGGGCGAAACGGTCGTCACGGACGGCAGCTTCATTCTCAAATCCGAAATGCTCAAGAACGAATTTGGCGAGGAATAA
PROTEIN sequence
Length: 395
MKKLFLSTRQPRFQKINGDEHRDDGFPLILTFSRREKEQPLAAIKQRENFSSGIQPGIGGKRGTFLPLPEGEGRGEGKPHVQSLCGVIAGIALLAVVAGCGQKTEPANTPTDAAPEAARAANRVTLTPENLQHVELKTEPAQLGNLGMTVRAAGRLSANLNKTAQVTSTFEGRLAKLNFDVNDRVKVGDVLALVESPELLGRQLEVKAPMDGVIIERHATTGELVDKARSIYTISDPAELWAIADIKERDIAAVKPGQEAAFTVLAYPHEPFHGRVVLLGNQVEPQTRTLEARIVVANPEGKLKPGMFADVEITTTILNNVLVIPDSALQTDGNDETVFVALGENQFEKRVVKLGEEHQGRVQILDGLQAGETVVTDGSFILKSEMLKNEFGEE*