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berkeley_reactor_200306_planktonic_scaffold_78559_170

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(202092..202559)

Top 3 Functional Annotations

Value Algorithm Source
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 154.0
  • Bit_score: 258
  • Evalue 4.30e-66
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDA2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 154.0
  • Bit_score: 258
  • Evalue 3.10e-66
TrmH family RNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 150.0
  • Bit_score: 174
  • Evalue 2.20e-41

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 468
ATGAATATCGTTTTGCTCGAACCCGAAATTCCGCCGAACACCGGCAACGTGGCGCGGCTCTGCGCCGCCACCAAATCCACGCTGCACCTGATCGAGCCGTTCGGATTCAAGCTGGACGATGCGCAGCTCAAGCGCGCGGGCATGGATTACTGGCGGCAGGTGGAATGGCATCGCTGGAAAAGCTGGCGCGAATTTGCCGGAAAACTTCCGGCCAATGTCCGCCTGTGGCTCGTGGAATCCAACGGACCGAGACTTTACAGCGACGCCAAATTTTCGCCGGCTGATTATCTCGTGTTTGGCCGGGAAACGGCTGGCTTGCCGAAGCAACTTTTGGAACAACACCGCGAAAACTGGCTGCGCATCCCGATGTTCAACGCGGCCTCGCGTTCGCTGAATTTGTCAAACTGCGTGGCGCTGGTTTTGTTTGAAGCGTTGCGGCAGCAGGGTTTTGCCGGCGAACTGCTTTGA
PROTEIN sequence
Length: 156
MNIVLLEPEIPPNTGNVARLCAATKSTLHLIEPFGFKLDDAQLKRAGMDYWRQVEWHRWKSWREFAGKLPANVRLWLVESNGPRLYSDAKFSPADYLVFGRETAGLPKQLLEQHRENWLRIPMFNAASRSLNLSNCVALVLFEALRQQGFAGELL*