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berkeley_reactor_200306_planktonic_scaffold_78559_191

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(229891..231342)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 349.0
  • Bit_score: 375
  • Evalue 5.80e-101
Sun protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XT31_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 349.0
  • Bit_score: 375
  • Evalue 4.10e-101
sun protein similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 510.0
  • Bit_score: 225
  • Evalue 2.50e-56

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1452
TTGAACGACCAAAATCCAAGACAAATTGCGGCCCGAATTTTATCGCAACGCCTCACCAGCGGCGAATTTACGGAAAATCTTCTCGAAACGGCCCTTGCCACGGCGCGGCTTTCCCCCGCCGACCGCGGCCTCTGCCACGAACTCGTCTGCGGCGTCGTCCGCTGGCAGGCCGCGCTCGACCGGCTGATCGCCCGCAAAACCACGCCCGGCCGCAACCAGCGTCCCGCCCTGCAAAACCTGCTGCGGCTCGGGCTTTACCAGATTTTCTGGCTCGACCGCATTCCGCCGCACGCTGCCGTGCATGAAACCGTCGAACTCGCCAAGCGTTCCGGCTACGGCTCGCAATCCGGCTTCATCAACGCAATTTTGCGCGGCTATTTGCGCGAGGCGGACGAGATCAAAAAAATTCTCGCCGACATGAAAGTGTCCCAGCCCGCGCTCGGCTGGTCGCATCCCGAATGGCTTGTGACGCGCTGGCTCCAGCGTTTCGGCGACGAAAATACCCGCAAACTGCTCGAATGGAACAACACGCCGCCGAAGACCTTCGCCCGCGTCAACACATTGAAAACCGACGCCGGCAAATTGGTGGAACGCTGGCGCGAGGAAAATGTGGATTACGATTTCGTCACCCGCGACTGGACCGGCGAAAATCTGGCGTTTGAACTCAAGTCCTTTCCATCACTAAACAGCCTTGGCAGTTTCCGCGACGGCTGGTTTTATTTGCAAGATCCCAGCACGCTGCTCGCGCCGATTTTGCTCGCGCCGCAACCGGGCGAAACCGTGTGGGACATCTGCGCCGCGCCCGGCGGCAAAACCACGTTCATCGCGCAGTTGATGAACAACGCCGGCAAAATCATCGCCAGCGATCTGGACTCAAACCGTTTAAAGCTGGTGAAGGAAAACTGCGCCCGCCTCGGCGCGACCTGCGTGGAAACCAGATTAAGCAATGAATTCCGCCCTCACCCTGACCCTCTCCCCCAGGAGAGGGAACAGCAGGCGACGCTTTCTGCTCCTTCGCCAACCAGCATTGCAAATCCAGCGGAACCATTCGTCAAGACGCTGGAACCGTTTCCCCCTCTCCCCGGGGGAGAGGGCCGGGGTGAGGGCGGTCAATCGTCCATTGTGTGCGACCGCATCCTGATTGACGCCCCCTGTTCCAACACCGGCGTCATGCGGCGGCGCGTGGATTTGCGCTGGCGCGTTTCGGAAGCGGAAATCGTGCGGCTGCAAAAAACGCAGCTGGCATTGCTCCATCAAGCCGCAGCCCAACTCAAGCCCGGCGGCGTCATTGTTTACAGCACGTGCAGTCTGGAACCGGAAGAAAACGGTGGCGTAATCAAGCAATTCCTCGCCGCCAACGCGGAATTCAAACTCGAAACCGAACGCCAGTTGCTGCCGTTTGCCGACGGCGTGGATGGCGCTTACGTCGCGCGCCTGAAACGGGCAGCCTGA
PROTEIN sequence
Length: 484
LNDQNPRQIAARILSQRLTSGEFTENLLETALATARLSPADRGLCHELVCGVVRWQAALDRLIARKTTPGRNQRPALQNLLRLGLYQIFWLDRIPPHAAVHETVELAKRSGYGSQSGFINAILRGYLREADEIKKILADMKVSQPALGWSHPEWLVTRWLQRFGDENTRKLLEWNNTPPKTFARVNTLKTDAGKLVERWREENVDYDFVTRDWTGENLAFELKSFPSLNSLGSFRDGWFYLQDPSTLLAPILLAPQPGETVWDICAAPGGKTTFIAQLMNNAGKIIASDLDSNRLKLVKENCARLGATCVETRLSNEFRPHPDPLPQEREQQATLSAPSPTSIANPAEPFVKTLEPFPPLPGGEGRGEGGQSSIVCDRILIDAPCSNTGVMRRRVDLRWRVSEAEIVRLQKTQLALLHQAAAQLKPGGVIVYSTCSLEPEENGGVIKQFLAANAEFKLETERQLLPFADGVDGAYVARLKRAA*