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berkeley_reactor_200306_planktonic_scaffold_84741_78

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 85986..87161

Top 3 Functional Annotations

Value Algorithm Source
Glycosyl hydrolase, family 88 n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XN13_CALS8 similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 386.0
  • Bit_score: 310
  • Evalue 2.20e-81
glycosyl hydrolase, family 88 similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 386.0
  • Bit_score: 310
  • Evalue 6.30e-82
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:ABP68298.1}; TaxID=351627 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 /; Tp8T 6331).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 386.0
  • Bit_score: 310
  • Evalue 3.10e-81

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Taxonomy

Caldicellulosiruptor saccharolyticus → Caldicellulosiruptor → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1176
ATGATTCGTTCAAAGCAAATTACCGCGAAACTGGCCGGTTCAACCCAGTTGAGACAGGACCGGCTGGCAACTATTTGTGACCTCTGCGTGCGCAAAACCCGGAGCAACATCAAACGCCTGGCCGACGATCCCCAATCGGCGGCCTGGTCGGCGGATGGAAACTATTTTGATTTCAAAGAAGGTTTCCACGAGATCGGGAACTGGACTTCCTCGTTCTTCACCGGCATGGCGCTGCTGGCCTGGCGCAGCACCGAGGACGAGTATTTTCTCGAACAAACCCTGCGCCTCGCGCCACATTACCGCAAGAAAGTGTTCACCCACTTCCTGGACACCCATCACGATCTCGGCTTCCTTTACTCGCTGTATTCCGTCGCCCTTTACAAACTGACCGGCGAGCAGACGCAGCGCGTCGTGGGCCTGCGCGCCGCCGCATTGCTCGCGCAACGTTTCAACCCGCGTGGCAACTTCATCCGCGCCTGGGGACGCATGGACGAAATTGAATCGCGCATCGGCGACGACCGGATGCGAACGGATAACATGGCCATCATTGATTGTCTGATGAACCTGCCGTTGTTGTATTGGGCGGGCAATGAAACCGGCGATGCAAAATTTTACGACATCGCCACGCGCCATGCCGACATGTGCCTTAAGTGCTTCGTCCGTCCGGACTATTCCACCAACAACATTTATCGCTTCGATCCTGAAACATGGCACCCGTTGGGCGATCCGAATAACGGATACTGGGCGCGCGGCGCGGCCTGGGCCATTTATGGTTTTGCGCTGAGTTACCGATACACGCAAAATGAGAAATATCTCAAAGCATCCCTGCGGCTGGCGAAGAAATTCATCGCCAGCCTGGATGAAGAAATCGTCCCGTGGAATGATTTTCATGAGTCGGCGCACCCTGGTCGCGTCCGGGATGCTTCGGCGGGATCGGTTGCCGTGTGCGGTTTCCAGGAACTGGCCCGGCATGGCGCGGCGGATGAGGAAATTATCCAGGCCAAGCAGGCCTTATTGGACCGGCTTTGCGACGATGATTATGTGGATTTCCGTAACACTTGCTGCGGTATGCAAAAACGCGGCCAGGGCGGCAAAAACGGCTACACCTCCTGGGGCGATTACTATTTGATGGAAGCCTTGGACCGCGAATTGAACGGAAACGAAATGTTTTGGTAA
PROTEIN sequence
Length: 392
MIRSKQITAKLAGSTQLRQDRLATICDLCVRKTRSNIKRLADDPQSAAWSADGNYFDFKEGFHEIGNWTSSFFTGMALLAWRSTEDEYFLEQTLRLAPHYRKKVFTHFLDTHHDLGFLYSLYSVALYKLTGEQTQRVVGLRAAALLAQRFNPRGNFIRAWGRMDEIESRIGDDRMRTDNMAIIDCLMNLPLLYWAGNETGDAKFYDIATRHADMCLKCFVRPDYSTNNIYRFDPETWHPLGDPNNGYWARGAAWAIYGFALSYRYTQNEKYLKASLRLAKKFIASLDEEIVPWNDFHESAHPGRVRDASAGSVAVCGFQELARHGAADEEIIQAKQALLDRLCDDDYVDFRNTCCGMQKRGQGGKNGYTSWGDYYLMEALDRELNGNEMFW*