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berkeley_reactor_200306_planktonic_scaffold_228973_73

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(83599..83937)

Top 3 Functional Annotations

Value Algorithm Source
RNP-1 like RNA-binding protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCN2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 107.0
  • Bit_score: 139
  • Evalue 2.00e-30
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:EDY15797.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 107.0
  • Bit_score: 139
  • Evalue 2.70e-30
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 116.0
  • Bit_score: 126
  • Evalue 3.70e-27

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 339
ATGAGCACAAAATTGTTCGTGGGAAACCTTTCCTACAACACCACTGAAAATGATCTGCAGGAGGCGTTTGGCGCCCACGGATCGGTGGTCGAAGCCAACCTCATGATGGATCGGATGACCGGCCGCTCACGCGGTTTTGCGTTTGTCACTTATTCCACACCCGAGGAAGCCCAGAAGGCGATTGACGCCATGCACGGCGCGCAATTGGATGGTCGTGCGTTGACCGTCAACATTGCCCGCCCGAAAGAGGAACGGCCCGGCGGTGGCGGCGGCGGTCGTGATCGCGGCCCGCGTCGTGATTTCGGCGGTGGCGACCGGGGTCGCCGTGAACGCTACTAG
PROTEIN sequence
Length: 113
MSTKLFVGNLSYNTTENDLQEAFGAHGSVVEANLMMDRMTGRSRGFAFVTYSTPEEAQKAIDAMHGAQLDGRALTVNIARPKEERPGGGGGGRDRGPRRDFGGGDRGRRERY*