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berkeley_reactor_200306_planktonic_scaffold_228973_81

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(90941..91246)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S6 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFD4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 101.0
  • Bit_score: 128
  • Evalue 3.10e-27
Ribosomal protein S6 {ECO:0000313|EMBL:EEF61298.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 101.0
  • Bit_score: 128
  • Evalue 4.40e-27
rpsF; ribosomal protein S6 similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 91.0
  • Bit_score: 73
  • Evalue 3.40e-11

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 306
GTGAAACGATACGAAGGTTTGTTCATCTTAAACCTGGCTGGACGCGAAGAGGGTGTGAAAGACGCCCTCGACAAGATTTCCACGGAAATCACCCAGGCCGGCGGCAAAATTGAAACGGTGCAGAAGATGGAAAGAAAGCCCTTTGCCCGCGTCGCGGACAAGCGCCACACCTCCGGCTTCTACGCGAACATCATTTTTGATGCCGCGCCCGCCGCAGTGGATTCGCTCCAAAAGAAATTCGATTTAAATCCGGACGTCTTCCGCGTGCTGTTCACCATCATGCCGGAAGTAAAGGCCGCGAAGTAA
PROTEIN sequence
Length: 102
VKRYEGLFILNLAGREEGVKDALDKISTEITQAGGKIETVQKMERKPFARVADKRHTSGFYANIIFDAAPAAVDSLQKKFDLNPDVFRVLFTIMPEVKAAK*