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berkeley_reactor_200306_planktonic_scaffold_44244_108

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(106326..109472)

Top 3 Functional Annotations

Value Algorithm Source
Putative ATP synthase F0, A subunit n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VP40_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 1047.0
  • Bit_score: 1607
  • Evalue 0.0
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:KGE13327.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 1047.0
  • Bit_score: 1635
  • Evalue 0.0
multidrug transporter AcrB similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 1051.0
  • Bit_score: 1601
  • Evalue 0.0

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Taxonomy

Sphingobacterium sp. ACCC 05744 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3147
ATGCTTAAAAAAATCATAGACAGACCGGTGCTGGCCACCGTGATCTCTGTCGTACTCGTCATTCTCGGGATTATGGGCCTGCTGCGACTGCCTATTACCCGTTTCCCCGACATCTCGCCACCTACCGTAATGGTAAGCGGGAGTTATCCCGGCGGCAACAGTGAAGCCGTATTGCGTTCGGTGGTAACGCCACTCGAAGAGCAGATCAATGGTGTAGAGAACATGCAGTACATCAAATCCTCTGCCAGCAATGACGGTTCTTTTTCTATATCCATCATCTTCAAACAGGGTGTGAATGCCGACCAGGCTGCCGTTAATGTGCAGAACCGGGTACAACAGGCTACGCCCATCCTGCCGCAGGAAGTGGTACGCATGGGGCTTACCACCTCCAAGCAGCAGAACAGTATGATCATGATCTTCGACATCTATACCGAAGACAATACGAAATACGATGAGCTGTTCCTGCAGAACTATGTCAACATTAACCTGATCCCCCAGATTAAACGCGTGCCCGGTGTGGGCCAGGCGCAGATGTTCGGCACCAAGGACTACTCGATGCGCATCTGGCTTAACCCGCAGAAGATGGCCAGCTACGGCCTGATCCCCGAAGATGTAACCGGCGCGATATCGCGCCAGAGCCTGGAATCGGCGCCCGGCAAACTGGGCGAAGAGTCGGATGCGGCGCTGGAATACGTAATCCGCTACCGGGGCAAGAAAAGTAAACCCGAGGAGTACGAGAACATCATCATCAGGCAAACCGGCAACGATCTCGTACGCCTGAAAGATGTGGCCCGTATAGAGTTTGGCTCCATCAGCTATAGCGGCAATACCACTTCCAACGGGAAGAACGCCGTAACCATCGCCATCCTACAGACTACGGGATCTAATGCCAACGATATCGAAGTAGGCGTTAAGAATGAGCTGGCACGTGCGGCCAAATCATTCCCGCCGGGTATCCGCTACCAGAGCCTGATGAGTACCAAAGACCGGCTGGACGAAGCTACAGGACAGGTAAAGTCGACCCTGATCGAAGCCTTCCTGCTGGTGTTCGTGGTGGTATTCCTGTTCCTGCAGGATTTCCGGTCCACGATCATCCCCGCCATTGCCGTGCCCGTGGCCATTGTGGGTACCTTCTTCGTATTGCTGGCGCTGGGTTTCACCATCAATATCCTGACGCTTTTTGCGCTCGTACTGGCGATCGGTATCGTGGTCGATGATGCCATCGTGGTGGTAGAAGCCGTACACAGTAAGATGGAAGACTCCGGGCTTTCGGCGCGCGAAGCCACGCACAGCGCCATGAGCGAAATAACCGGTGCGGTAATTTCGATTACCCTGGTGATGTCGGCCGTATTTATCCCGATCGGTTTCATGACCGGTTCCTCCGGCTTGTTCTACAAACAGTTTGCCTATACCCTGGCTGCGGCAATCATCATCTCGGCGGTAAACGCCCTGACCCTGACGCCGGCCCTGTGTGCATTACTGCTTAAAAACAACCATGCCCATAAAGACGGGAAACAACCCGGCTTCAAACAAAGATTCTTTACGGCCTTCAATGCAGGCTTCAGCAATATGACCGGCAAATATGTAGGCAGTGTACGGTTCCTGGCCCGGAAGAAATGGCTGGCCGCAGTTTTGATCATAGGCACCTTTGCCCTGGCCGCCTGGCTGATGAACAGTACGCCCAAAAGCTTTGTGCCTATGGAGGACGACAACTTTATCGCCTATAGCCTGACCATGCCCCCCGGCACGGGTTTGACGAAGACTACCGAGGTAGCCAAAAAGATGGATAGCCTTATTATGGGTACGGAAGCGGTAGACCGCAACTCGAGCATTACCGGCTTCAGCCTGCTGAGCAATGCCGCCGGACCTTCTTATGCGATGGGCTTTATCAAACTGAAGGACCCCAAACACCGGGGCGCGATTAAAGACATCAATGTTATCCATGGTATGATCTCCGAAAAGCTGGCCACGATCAAAGAAGGTTCTGTGATTGCCTTCCGCTTCCCGCCGGTAGAAGGTTATGGCGTGATTAATGGCGCCGAGATTGTATTGCAGGACAGGACCGGCAAAGACCCCGCTTCGCTGAAGGCCATGGCCGATAAAGTGATCGGACAGATCATGCAACAAAAAGGCGTGAAGTTTGCCTATACTACCTTCCGCGCCGACTATCCGCAACTGGAACTCGAAGTCGACGAAGAGCGGGCCAACCAATTGGGTGTGGATGTAAGCAGTTTGCTGAGTACGATACAGACTTATTTTGCCGGCGACCAGTCGCTTAACTTCAACCGCTTTGGTAAGTTTTACCGCGTCAGCATCAAAGCCGACGGCGTGTTCCGGACCGATGAAGCGGCCTTCGACGAGATCTTTGTCCGCAGCAGCAGCGGGGCCATGGTGCCTGCCAAGTCGATCGTTACCCTGCATAAGGTCTATGGCCCTGAAACCATCAGCCGCTACAACCTGTACAATGCCCTTACCATAAACGTAGAAGCACAGGCAGGTTATAGTAATGGTGCGATCATGGACATCCTGGAAAAACAGGTATTGAATCAACTGCCCGGCGACTATAGTTACGAATGGACGGGCTTGAGTCTCGAAGAAAAAGCCTCCGGCAGCCAGGCCGTATTTATCCTGTTGCTGAGCCTGCTGTTTGTCTACTTCCTGCTGGCGGCACAATACGAGAGTTACCTGATCCCGCTGGCTGTGCTCTTATCTATACCCACCGGGGTTATCGGCGCCTTCCTGGGCATTAAAGCCATAGGACTTGATAATAATATTTACGTGCAGGTAGGACTGATCATGCTGATTGGTCTGCTGGCCAAAAATGCCATATTGATCGTAGAGTTTGCCATACAACGCCGTAAAACAGGGATGAGTATTATGGATGCGGCGCTACAGGGCGCCAAGTCCAGGCTGCGGCCCATCATCATGACTTCGCTCGCCTTTATCGTGGGTATGGTACCGCTGATGATGGCCAAAGGCGGTTCGGCTGCGGGCAACAAATCGATCAGTACCGGCGCCGCCTTTGGTATGCTGAGCGGCGTATTGCTGGGCGTGTTTGCCATCCCCCTGCTTTATATGCTTTTCCAATACCTGCAGGATAAAGTATCCGGCAAAAAAACAGGAAACGATCAAAGAACAGTATCATGA
PROTEIN sequence
Length: 1049
MLKKIIDRPVLATVISVVLVILGIMGLLRLPITRFPDISPPTVMVSGSYPGGNSEAVLRSVVTPLEEQINGVENMQYIKSSASNDGSFSISIIFKQGVNADQAAVNVQNRVQQATPILPQEVVRMGLTTSKQQNSMIMIFDIYTEDNTKYDELFLQNYVNINLIPQIKRVPGVGQAQMFGTKDYSMRIWLNPQKMASYGLIPEDVTGAISRQSLESAPGKLGEESDAALEYVIRYRGKKSKPEEYENIIIRQTGNDLVRLKDVARIEFGSISYSGNTTSNGKNAVTIAILQTTGSNANDIEVGVKNELARAAKSFPPGIRYQSLMSTKDRLDEATGQVKSTLIEAFLLVFVVVFLFLQDFRSTIIPAIAVPVAIVGTFFVLLALGFTINILTLFALVLAIGIVVDDAIVVVEAVHSKMEDSGLSAREATHSAMSEITGAVISITLVMSAVFIPIGFMTGSSGLFYKQFAYTLAAAIIISAVNALTLTPALCALLLKNNHAHKDGKQPGFKQRFFTAFNAGFSNMTGKYVGSVRFLARKKWLAAVLIIGTFALAAWLMNSTPKSFVPMEDDNFIAYSLTMPPGTGLTKTTEVAKKMDSLIMGTEAVDRNSSITGFSLLSNAAGPSYAMGFIKLKDPKHRGAIKDINVIHGMISEKLATIKEGSVIAFRFPPVEGYGVINGAEIVLQDRTGKDPASLKAMADKVIGQIMQQKGVKFAYTTFRADYPQLELEVDEERANQLGVDVSSLLSTIQTYFAGDQSLNFNRFGKFYRVSIKADGVFRTDEAAFDEIFVRSSSGAMVPAKSIVTLHKVYGPETISRYNLYNALTINVEAQAGYSNGAIMDILEKQVLNQLPGDYSYEWTGLSLEEKASGSQAVFILLLSLLFVYFLLAAQYESYLIPLAVLLSIPTGVIGAFLGIKAIGLDNNIYVQVGLIMLIGLLAKNAILIVEFAIQRRKTGMSIMDAALQGAKSRLRPIIMTSLAFIVGMVPLMMAKGGSAAGNKSISTGAAFGMLSGVLLGVFAIPLLYMLFQYLQDKVSGKKTGNDQRTVS*