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berkeley_reactor_200306_planktonic_scaffold_101710_117

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 130597..131502

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KTJ9_HALH1 similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 300.0
  • Bit_score: 396
  • Evalue 1.80e-107
Transcriptional regulator {ECO:0000313|EMBL:KEQ30648.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 299.0
  • Bit_score: 397
  • Evalue 1.20e-107
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 300.0
  • Bit_score: 396
  • Evalue 5.20e-108

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Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 906
ATGGGCAAGCCACAGAGTATAGAAGAGTTTTACCGGTCCAAAATGAACTGGATACCGGAAAACCTGCAGAAGGAGATCGGGCATTTTAACGTGTTCCGGTCCGATGAATATGTGGGCTGCAGTCCCAAACCCGTTCCTTACAACAGGAAAGATTTTTTTAAGATCAGCCTGATTATCGGTAAGAACCGGGTACACTATGCCGACAAGGCGGTAACGATAGAAAAGCAGGCGCTGTTGTTTGCCAACCCGATGGTGCCTTATAGCTGGGAAGCGCTGGAGGAACAACAATCAGGCTTCTTCTGCATTTTTACGGAAACGTTTTTTAATCATTTCGGGGCTATGCGCGACTACCCGGTGTTCCAGCCGGGTTGCAACCCCGTCTTTATGCTCGACGACGGGCAACTGGATGCCGTACGGACTATATTCCGGCAGATGCTTGAAGAGATCGGCTCCGATTATGTGTATAAGTATGACGTGCTGCGCAACCTTGTCTTCAACCTCGTGCACCTTGCTTTAAAGATGCAGCCGGCTACCGCTACCCAGCATCGGGGGCTGAATGCGGCCACCCGTGTGTCTTCGCTTTTTATGGAACTGTTGGAAAGACAATTCCCGGTAGAGTCGCCGATGCAGCAGGTACGCCTGCATACTCCCTTGGCTTATGCGGAGCAACTTGCGGTGCATGTCAACCACCTGAACCGATCGCTAAAAGCCGTTACCGGCAAAACTACGTCGCAGCTTATTGCTGAACGGATGGGCCAGGAGGCGCGTATCCTGCTCAAGCATACCGACTGGAATATTTCGGAGATTGCCTGGTGCCTGGGCTTTAAGGATCTGCCGGCGTTTATAAATTTCTTCAGGAAAAGCATGCAACAGAGTCCCGGCGCTTTCCGGGAGCAGGTTGCCTGA
PROTEIN sequence
Length: 302
MGKPQSIEEFYRSKMNWIPENLQKEIGHFNVFRSDEYVGCSPKPVPYNRKDFFKISLIIGKNRVHYADKAVTIEKQALLFANPMVPYSWEALEEQQSGFFCIFTETFFNHFGAMRDYPVFQPGCNPVFMLDDGQLDAVRTIFRQMLEEIGSDYVYKYDVLRNLVFNLVHLALKMQPATATQHRGLNAATRVSSLFMELLERQFPVESPMQQVRLHTPLAYAEQLAVHVNHLNRSLKAVTGKTTSQLIAERMGQEARILLKHTDWNISEIAWCLGFKDLPAFINFFRKSMQQSPGAFREQVA*