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berkeley_reactor_200306_planktonic_scaffold_164454_76

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(77006..77896)

Top 3 Functional Annotations

Value Algorithm Source
oxidoreductase n=1 Tax=Dyadobacter beijingensis RepID=UPI00036839DB similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 296.0
  • Bit_score: 410
  • Evalue 9.20e-112
Putative short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EDM36118.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 296.0
  • Bit_score: 409
  • Evalue 2.20e-111
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 287.0
  • Bit_score: 408
  • Evalue 9.90e-112

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Taxonomy

Pedobacter sp. BAL39 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 891
ATGAAAAAAGTATGGTTCATAACAGGTAGCTCCCGCGGACTGGGACGCAGCCTCACCACAGCAGTACTGGCCCAGGGCGACCTGGTAGTGGCTACAGCCAGGGACACGAAAAACCTCGAAACACTGACCCGCGACTATCCCGAACAGGTATTGGCCCTCGCGCTGGATGTAAACGAAGCAGAACAGGTCCAACAGGCCGTCGCAAAAGCGATAGCACACTTCGGGAGGATCGATGTACTGGTCAATAACGCCGGCTTTGGTATTATCGGCGCCGCCGAGGCCTATACCGAGGAACAGGTACGCAGTCAGCTGGAAACGAATCTCTATGCCCCGATCGCCATTACCCGCGCAGTATTGCCGCATATGCGCAAACAGGGCTCTGGTCGTATCCTGCAGATCAGTTCGGTAGGCGGCCGTGTGGGTAATGCGGGCCTTACCATGTACCAGGCGGCCAAGTTTGGCCTGGGCGGCTTTAGCGAAGCGCTGGCCCGCGAAGTAGCACCACTGGGCATTTTCGTAACCAGTGTGGAACCCGGCGGCTTCCGTACCGATTGGGCCGGCGCCTCGATGAGTTACGCAACACCGATCGCAGGTTATGAAGAATCGGTAGATCAGCGTGCAGCCTTTATTAAAGACGGCAATTTTGTACCGATGGGCGACCCCGATAAAGCAGCACAGGCTATGATCCGGTTGACCGAGAGCCCCGAACCGCCCATACACCTGCTGTTGGGCAGCGAAGCCGTGGGTATGGTACAAGCCAGTTTAAAAGAAAGGCAGGCCGAGCTCGACCAGTGGAGCAGCCTGAGTAAAAGCACCGATCACGACGAAGCAGTAGATTTCCTCAGCACCACATTTGGCAAGCTGTTGGTTAAACCGGAAGAAGAGGCTTAA
PROTEIN sequence
Length: 297
MKKVWFITGSSRGLGRSLTTAVLAQGDLVVATARDTKNLETLTRDYPEQVLALALDVNEAEQVQQAVAKAIAHFGRIDVLVNNAGFGIIGAAEAYTEEQVRSQLETNLYAPIAITRAVLPHMRKQGSGRILQISSVGGRVGNAGLTMYQAAKFGLGGFSEALAREVAPLGIFVTSVEPGGFRTDWAGASMSYATPIAGYEESVDQRAAFIKDGNFVPMGDPDKAAQAMIRLTESPEPPIHLLLGSEAVGMVQASLKERQAELDQWSSLSKSTDHDEAVDFLSTTFGKLLVKPEEEA*