ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_176984_13

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(11911..13818)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase subunit A {ECO:0000313|EMBL:ABQ06341.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ABQ06341.1};; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 635.0
  • Bit_score: 1048
  • Evalue 0.0
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1) similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 635.0
  • Bit_score: 1048
  • Evalue 0.0
Succinate dehydrogenase subunit A n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FEM1_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 635.0
  • Bit_score: 1048
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium johnsoniae → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1908
ATGGATGCAAAAATACCACCGGGCCCGCTGGCAGATAAATGGAACTATTATAAGGCACATGCACGGCTCGTCAATCCGGCCAACCGGAAGTCGATGAAGGTGATCGTAGTGGGAACGGGACTTGCCGGTGCTTCCTGCGCTGCATCCCTGGCCGAACAGGGATATGCGGTCGCATGTTTCTGTTTCCAAGATTCTTCACGCAGGGCGCATTCCGTAGCGGCCCAGGGTGGGGTGAATGCCTGCAAAAATTATAAGAACGACGGCGATAGCGTGTACCGGATGTTCTACGATACGATTAAGGGCGGCGACTTCCGTTCGCGGGAAGCCAATGTATACCGGCTTGCGGAATGCTCTGCTGCTTTGATCGACCAGGCGGTGGCCCAGGGCGTACCCTTTGCCCGGGAGTACAGCGGGTACCTGAGCAATCGCTCGTTTGGCGGCGTCCAGGTATCGCGTACCTTTTATGCGCGGGGACAAACCGGTCAGCAATTGCTGCTGGGGGCCTACCAGGCGCTGATGCGACAGGTACATGCCGGTAAGGTGCAACTGCATACCCGTCATGAAATGCTCGACCTTGTAGTGGTGGGGGGTAAGGCGAAAGGTATTATCGTACGTAATCTCGAAACCGGTAAACTGGAACGTTATGCAGCCGATGCCGTGGTGCTGGCCAGCGGCGGCTACGGTAAGATTTATTACTTGTCTACACTGGCTATGGGCTGTAATGCTTCTGCCATATGGCGGGCGCATAAAAAAGGTGCTTATATGGCCGGGGTAAGCTGGGTACAGGTACACCCGACTTCGCTGCCGCAGTCGGGGCAGCATCAATCGAAGCTGACCCTCATGTCCGAATCGCTGCGTAACGATGGCCGGATATGGGTACCTTTAAAAGCCGGGGACGACCGTAACCCGAACGATATACCCGAGGCCGAACGCGACTACTACCTCGAACGGCGTTATCCTTCATTTGGTAACCTTGCGCCCCGTGATATCTCTTCGCGCGCTGCGAAAGAGCGTATCGACGCGGGACATGGCGTCGGTGTTATGAAAAATGCGGTGTACCTCGATTTCTCCAAAGCGATCAAAGAACAAGGCAGGGAGAAGATTGCTGAGAAGTATGGCAACCTCTTCAGTATGTATCAAAAGATAACCGGTATCAATGCCTATGCGCAACCCATGCTGATATCGCCCGCGGCGCATTTTACCATGGGCGGACTCTGGGTCGATTATACCCTCATGAGTACGATTGCCGGTTTGTTCGTATTGGGCGAAGCCAATTTTTCAGATCATGGGGCTAACCGCTTAGGGGCGAACTCTTTGCTGCAAGCCTGCGTGGACGGCTATTTCGTGGCGCCTTACACTATCCCCGACTACCTGGCGGGTGAGTTGAAAAGCGAAAAAATTACCACAGAGCACCCGGCATTCGAGGAGGCGGAAGCCGCCGCCGGTGCAAAGATCAACCGGTTACTGTCTATTAAAGGCGACCTGTCTGCCGATTATTTTCATAAGACCCTGGGGAGCCTGCTTTACGATACCTGTGGTTTGTCACGTTCCAAGGAAGGCCTGGAGCGCGCTATACGCGAGATCAGCACCTTGCGGGAACAATTTTACAGCCGGCTGAAAGTAACCGGTGACGATAAGGTGAATACCGAACTGGAAAAAGCCGGGCGTGTTGCGGATTATCTCGAGCTGGGCGCACTGATGTGCACCGATGCCCTGACCCGCGAGGAGTCCTGTGGGGCGCACTTCCGGGAAGAATACCAAACCGCGGATGGCGAAGCGGTACGTAACGATAAGGACTTTTGTTATGTACCCGCCTGGGAATGGAAGGGCGAAGATCTGCCGCATGTATTACACCCCGAACCACTCGTCTTTGAAGCGGTAGCGCTTGTTACCCGGAGTTATAAATAA
PROTEIN sequence
Length: 636
MDAKIPPGPLADKWNYYKAHARLVNPANRKSMKVIVVGTGLAGASCAASLAEQGYAVACFCFQDSSRRAHSVAAQGGVNACKNYKNDGDSVYRMFYDTIKGGDFRSREANVYRLAECSAALIDQAVAQGVPFAREYSGYLSNRSFGGVQVSRTFYARGQTGQQLLLGAYQALMRQVHAGKVQLHTRHEMLDLVVVGGKAKGIIVRNLETGKLERYAADAVVLASGGYGKIYYLSTLAMGCNASAIWRAHKKGAYMAGVSWVQVHPTSLPQSGQHQSKLTLMSESLRNDGRIWVPLKAGDDRNPNDIPEAERDYYLERRYPSFGNLAPRDISSRAAKERIDAGHGVGVMKNAVYLDFSKAIKEQGREKIAEKYGNLFSMYQKITGINAYAQPMLISPAAHFTMGGLWVDYTLMSTIAGLFVLGEANFSDHGANRLGANSLLQACVDGYFVAPYTIPDYLAGELKSEKITTEHPAFEEAEAAAGAKINRLLSIKGDLSADYFHKTLGSLLYDTCGLSRSKEGLERAIREISTLREQFYSRLKVTGDDKVNTELEKAGRVADYLELGALMCTDALTREESCGAHFREEYQTADGEAVRNDKDFCYVPAWEWKGEDLPHVLHPEPLVFEAVALVTRSYK*