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berkeley_reactor_200306_planktonic_scaffold_59817_60

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(61514..62044)

Top 3 Functional Annotations

Value Algorithm Source
cytochrome C n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746004 similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 177.0
  • Bit_score: 176
  • Evalue 1.30e-41
Putative uncharacterized protein {ECO:0000313|EMBL:EDY81538.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 178.0
  • Bit_score: 170
  • Evalue 1.30e-39
FmdB family regulatory protein similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 191.0
  • Bit_score: 138
  • Evalue 1.10e-30

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Taxonomy

Verrucomicrobiae bacterium DG1235 → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 531
ATGCCCATATATGAATTCTACTCTCCGGAAACGAATCGCATATACAGCTTTCTGGCCCGCAGCCTGAGCCTGCGGGACGCCATCCCGCGCTGCCCGGATAATCCCGGTGCGCGCATGGAGCGGATGGTCTCCCAGTTTGCCGTGACGGGAAGGGCGAAGGAACAGTCGACCGAACCCGGCCCCGAGATGATGGATGCCGGGATGGAGCAGGTGCTGGCCCGGATGGAGCGCGAGATGTCGACGCTCAATCCCGATAATCCCGATCCGCGCCAGCTCGGGCGCATGATGCGGCAAATGGCCGAGGCGACCGGGCAGAAGGTGCCCGAGGGCATGCGGGAAATGATCATGCGACTGGAGCGCGGGGAGGACCCCGAGAAGCTCGAGCAGGAGTATGGGGACAATCTGGAGGATTTTGCCGAGGGCGAGGAGGGAGCGATGGGAGTGGAAAAAACGCTCGCCCGTATCCGCCGGGGGCTGCCCTCCCGCGATCCCCAGCTGTACGAGATGCGGGATTACCTTCCCGAGGCCTGA
PROTEIN sequence
Length: 177
MPIYEFYSPETNRIYSFLARSLSLRDAIPRCPDNPGARMERMVSQFAVTGRAKEQSTEPGPEMMDAGMEQVLARMEREMSTLNPDNPDPRQLGRMMRQMAEATGQKVPEGMREMIMRLERGEDPEKLEQEYGDNLEDFAEGEEGAMGVEKTLARIRRGLPSRDPQLYEMRDYLPEA*