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berkeley_reactor_200306_planktonic_scaffold_151594_86

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(97993..100152)

Top 3 Functional Annotations

Value Algorithm Source
Endoglucanase {ECO:0000256|RuleBase:RU361166}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361166};; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 730.0
  • Bit_score: 508
  • Evalue 1.40e-140
Glycosyl hydrolase family 9,cellulose-binding protein with CBM2 domain n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EQW4_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 730.0
  • Bit_score: 508
  • Evalue 1.00e-140
glycoside hydrolase family protein similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 458.0
  • Bit_score: 493
  • Evalue 9.70e-137

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Taxonomy

Leptolyngbya sp. PCC 7375 → Leptolyngbya → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 2160
ATGTATCGCCGTCTCTTTCTCGGATTTCTCCTCGTCATCTGCGTGCTGATGATCGGGGAGATCTTCAAGCCCCTGCAGCCGCGCGCGACGTGGCGCACGGTGAATGACTGGGGCGCAGGAGTGACTGGGGAGTTCACCATCGACAACCCGACCGGCCAGGACATCGACGGCTGGACGCTGAGGTTTGATTATCCAGGAAAGATCGAGGGCATCTCCGGGGCGACGGTCATCGATCAGGACGGGACACAATACCTTGTGCGGCCGGTGGAGTGGAATAGCGTCATCGCACCAGACCGCTCGGCTACGGTGGAACTTCGCATGTCGCCGGGTGGATATCTCCCGCGTCGGGTGAAGGTCGATACGAAACGTGTTCCCGCAAGCAATGCGGCGGAAAAGCCGGACGACATTTTCATGCTGGGGGAGTCGCGATTTGGGCGTAGTACCCAGCCAGAACCTCTGGCGGGGAATGGCAGTCCCGCTCTGGCCCGACTCCGCTATGGAGCGGTGGAGCTGATCTATCGCGTCGTGCAGGATTACGGACACAAGATGGAATCGGAGGTCCTGATCCGGAATAACAGTTGGGAGACGTTACGTGACTGGACGATCTTTCTCGATTTTCCCCGGCGAATCACCGCTGTGCAAGGTGGCACGCAAACTGCCCAGGCGGGAGCCAACCATCGGCTGGACTCGGACTCGGTATTGCCCATCCCGCCCAAGGGGGAATTGCGGTTGACCCTGTGGGCGGAGCCGGGCCTGAAGCTTGATCCGCCTCGACGCATGCTTTTCCGTGCGCGCTCGGGATCCCAAAGCCGACCGGATTTCAACTATGCCGCAGCTCTCCAGATGTCTCTGTATTTTTACGAGGCGCAACGCTCGGGCAAGATTGGAGACACCCGGGTGGCGTGGCGGCGCGATTCCGGGCTCAGTGACGGGGCGGACAAGGGCGTCGATCTCACGGGGGGGTACTACGATGCCGGCGACCATATGAAGTTTACCTTCCCGCTCAGTTCGGCGTTATCGATTCTCTCGTGGGGCGGGCTGGAGTACCGGGCCGGGTATGAAAAGGCGGGTCAATGGAGTGCGCTCCTCGATACTGTGCGGTGGGGGACGGACTGGTTGATCAAGGCGCACGTCGCGCCCAACGAACTCTATGCGCAGGTGGGGGATGGGCGGCTTGACCACGCCTACTGGGGGCCGCCGGAGCGGATGACGATGAAGCGTCCTTCGTACAAAATCACTGCCAAGGCTCCCGGTTCAGATCTCGCTGGCGAGGCATCGGCAGCGCTGGCCTCCGCGTCGATCCTATTTCTCAAGGAAGACCCCTCCTATGCAGCCCTCCTGCTACGGCACGCGCGCGAACTCTATGACTTTGCGGTCACCTCCCCCGGGTCGTACAGCGATTCCGTCCCGGCGGCGAAGGAGTTTTATCCCTCGCGTTACGGATACCAGGATGAGGTGGCTTGGGCGGCGGCATGGCTCTACTCGGCCACCGGGGAAAAGCGTTATCTCGATGACGCCACGGCGATTTACAAGGACTCTATTCAAGGGCGGCTGACCGGTGCAGCGGCCTGCTGGGATGACAAGCGGCCCGCGGTCGCAGTGCTGATGGCGCGCATCACACGCAAGGACATCTACAAGAGGGACGCCGAGCAGTTTCTCGACTACTGGACGGATGGGCGGTTCGGCCCGCAGGTGAGATATACCCCGGGCGGCCTGGCCTGGCACAATGAATGGGGTCCTTTGCGCTACGCGGCAAATGCGGCATTCCTTGCCTTTGTGTACAGCGATCGCGTGGCGGATTACCGCTACATGTACCACCGGTTTGCGAAGCGGCAGATCAACTACATCCTCGGCGACAATCCCGCCAGGCGGAGCTACCTCGTCGGATTTGGAAATAACCCGCCGATGAATCCCCATCATCGCGCCTCGCACGACTCGCCCGACAACGACATCAATAACCCGGCAAACAACGCACACGTCCTTTACGGAGCGTTGGTAGGTGGCCCCTCGAGCCTCGACGATTTTGACTATGAGGACAATCGCCGCGACGTTCGCCAGAATGAGGTGGCGCTCGATTACAATGGCGGCCTCACTGGCGCTCTCGCCCGTATGGTGATGTTGAACGGCGGCAGGCCGATTGCGGTCTTTCCGCCCAAATAA
PROTEIN sequence
Length: 720
MYRRLFLGFLLVICVLMIGEIFKPLQPRATWRTVNDWGAGVTGEFTIDNPTGQDIDGWTLRFDYPGKIEGISGATVIDQDGTQYLVRPVEWNSVIAPDRSATVELRMSPGGYLPRRVKVDTKRVPASNAAEKPDDIFMLGESRFGRSTQPEPLAGNGSPALARLRYGAVELIYRVVQDYGHKMESEVLIRNNSWETLRDWTIFLDFPRRITAVQGGTQTAQAGANHRLDSDSVLPIPPKGELRLTLWAEPGLKLDPPRRMLFRARSGSQSRPDFNYAAALQMSLYFYEAQRSGKIGDTRVAWRRDSGLSDGADKGVDLTGGYYDAGDHMKFTFPLSSALSILSWGGLEYRAGYEKAGQWSALLDTVRWGTDWLIKAHVAPNELYAQVGDGRLDHAYWGPPERMTMKRPSYKITAKAPGSDLAGEASAALASASILFLKEDPSYAALLLRHARELYDFAVTSPGSYSDSVPAAKEFYPSRYGYQDEVAWAAAWLYSATGEKRYLDDATAIYKDSIQGRLTGAAACWDDKRPAVAVLMARITRKDIYKRDAEQFLDYWTDGRFGPQVRYTPGGLAWHNEWGPLRYAANAAFLAFVYSDRVADYRYMYHRFAKRQINYILGDNPARRSYLVGFGNNPPMNPHHRASHDSPDNDINNPANNAHVLYGALVGGPSSLDDFDYEDNRRDVRQNEVALDYNGGLTGALARMVMLNGGRPIAVFPPK*