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berkeley_reactor_200306_planktonic_scaffold_174515_72

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 65556..66539

Top 3 Functional Annotations

Value Algorithm Source
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 327.0
  • Bit_score: 646
  • Evalue 1.20e-182
GDP-L-fucose synthase n=1 Tax=Microbacterium paraoxydans RepID=UPI00036487A6 similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 327.0
  • Bit_score: 595
  • Evalue 1.70e-167
nucleoside-diphosphate-sugar epimerase similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 320.0
  • Bit_score: 583
  • Evalue 3.20e-164

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 984
GTGGTGACGGCCGTTGACGGCGTGGAGTACACGCCGGGTGAGCTCGACCGTGACGCGACCTTCTACGTCGCGGGTCACCGTGGTCTGGTCGGATCGGCGATCGTGCGGAAGCTCGAGGCCTCGGGGTTCGAGCACATCGTGGGCAAGCCGTCGGCCGAGCTCGACCTCAAAGACCGCGACGCGGTGTTCGCCTACATGGGCGAGGTCAAGCCGAAGTACGTCGTGCTGGCGGCCGCGAAAGTCGGCGGCATCCTCGCGAACTCGACCTATCCGGTCGATTTCCTCAGCGACAACATGCGCATCCAGGTCAACGTGCTCGACGCGGCGCTCGCGAATGATGTCGAGCGCGTGCTGTTCCTCGGGTCGTCGTGCATCTACCCGAAGTTCGCCGAGCAGCCGATCCGTGAGGACTCTCTGCTCACCGGGCACCTGGAGCCCACGAACGACGCCTACGCGATCGCCAAGATCGCCGGCATCCTGCAGACGCAGGCCGTGCGGCGCCAGTACGGCCTGCCGTGGATCAGCGCGATGCCGACGAACCTCTACGGGCCGAACGACAACTTCTCGCCGAAGGGCTCGCACGTGCTGCCGGCGCTCATCCGCCGCTATGACGATGCGGCGAAGTCCGGAGCGCCGTCGGTCACCAACTGGGGAACCGGGACGCCGCGGCGCGAGTTCCTGCACGCCGACGACATGGCCGATGCCTGTCTCCATCTCTTGGAGCACTACGACGGCCCGGATCAGGTCAACGTCGGGACCGGCAGTGACGTGACCATCCGCGAGATCGCCGAGACGATCGCCGGGGTCACGGGCTTCACGGGTGAGACCGCGTGGGACACGTCGAAGCCCGACGGCACTCCGCAGAAGCTGCTCGACGTCTCCAAGCTCGCCGAGGCGGGCTGGACGGCCAAGATCACGCTCGAAGAGGGCATGGAGCGCACGGTCGCCTGGTACCGCGATCACGTCGACAGCATCCGCGAGTAG
PROTEIN sequence
Length: 328
VVTAVDGVEYTPGELDRDATFYVAGHRGLVGSAIVRKLEASGFEHIVGKPSAELDLKDRDAVFAYMGEVKPKYVVLAAAKVGGILANSTYPVDFLSDNMRIQVNVLDAALANDVERVLFLGSSCIYPKFAEQPIREDSLLTGHLEPTNDAYAIAKIAGILQTQAVRRQYGLPWISAMPTNLYGPNDNFSPKGSHVLPALIRRYDDAAKSGAPSVTNWGTGTPRREFLHADDMADACLHLLEHYDGPDQVNVGTGSDVTIREIAETIAGVTGFTGETAWDTSKPDGTPQKLLDVSKLAEAGWTAKITLEEGMERTVAWYRDHVDSIRE*