Alias: RUB134_3
name | lists | location/seqs | annotations | notes |
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cn_combo_scaffold_32_31
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(23793..24218)
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ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000255|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000255|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=NDK_METPP
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cn_combo_scaffold_32_32
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(24277..26454)
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rluB; ribosomal large subunit pseudouridine synthase B RluB (EC:5.4.99.-)
rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;"
Pseudouridine synthase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSW3_RUBGI
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cn_combo_scaffold_32_33
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(26451..27254)
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Segregation and condensation protein B n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSW4_RUBGI
scpB; segregation and condensation protein B
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosu
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cn_combo_scaffold_32_34
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(27535..28545)
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Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPJ5_9BURK
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cn_combo_scaffold_32_35
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
28620..29447
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Outer membrane protein assembly factor BamD n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIG5_9BURK
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkhol
putative lipoprotein
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cn_combo_scaffold_32_36
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(29389..31461)
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Helicase c2 n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPJ3_9BURK
putative ATP-dependent helicase
Helicase c2 {ECO:0000313|EMBL:EGJ10261.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
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cn_combo_scaffold_32_37
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(31482..31703)
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Uncharacterized conserved small protein containing a coiled-coil domain n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIG7_9BURK
Uncharacterized conserved small protein containing a coiled-coil domain {ECO:0000313|EMBL:EHR71787.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Bu
hypothetical protein
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cn_combo_scaffold_32_38
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
31748..32527
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Serine/threonine protein phosphatase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSW9_RUBGI
serine/threonine protein phosphatase
rbh
Serine/threonine protein phosphatase {ECO:0000313|EMBL:BAL96106.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (s
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cn_combo_scaffold_32_39
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(32537..33634)
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Putative ATPase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIH0_9BURK
Putative ATPase {ECO:0000313|EMBL:EHR71790.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
putative AFG1 ATPase family protein
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cn_combo_scaffold_32_40
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(33711..35141)
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Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubriviva
odhL; 2-oxoglutarate dehydrogenase E3 component OdhL (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPI8_9BURK
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cn_combo_scaffold_32_41
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(35152..36390)
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Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxI
odhB; 2-oxoglutarate dehydrogenase E2 component OdhB (EC:2.3.1.61)
2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIH2_9BURK
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cn_combo_scaffold_32_42
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(36550..39408)
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odhA; 2-oxoglutarate dehydrogenase E1 component OdhA (EC:1.2.4.2)
2-oxoglutarate dehydrogenase, E1 component n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIH3_9BURK
2-oxoglutarate dehydrogenase, E1 component {ECO:0000313|EMBL:EHR71793.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI
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cn_combo_scaffold_32_43
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(39773..40744)
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2-nitropropane dioxygenase-like enzyme n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIH9_9BURK
putative nitronate monooxygenase
2-nitropropane dioxygenase-like enzyme {ECO:0000313|EMBL:EHR71799.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001
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cn_combo_scaffold_32_44
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(40744..42519)
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acyl-CoA dehydrogenase (EC:1.3.99.3)
Putative acyl-CoA dehydrogenase oxidoreductase protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVT5_9BURK
Putative acyl-CoA dehydrogenase oxidoreductase protein {ECO:0000313|EMBL:EGJ12453.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivi
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cn_combo_scaffold_32_45
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(42605..43549)
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Electron transfer flavoprotein subunit alpha n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVT6_9BURK
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:EGJ12454.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoa
electron transfer flavoprotein subunit alpha
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cn_combo_scaffold_32_46
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(43552..44301)
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Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQ34_9BURK
electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
electron transfer flavoprotein subunit alpha/beta
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cn_combo_scaffold_32_47
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(44425..45735)
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Major facilitator superfamily permease n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WII4_9BURK
Major facilitator superfamily permease {ECO:0000313|EMBL:EHR71804.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001
integral membrane protein
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cn_combo_scaffold_32_48
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(45937..47211)
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Putative cytochromre c biogenesis protein CcmI n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRB8_RUBGI
hypothetical protein; K02200 cytochrome c-type biogenesis protein CcmH Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ccmI; putative cytochromre c biogenesis protein CcmI
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cn_combo_scaffold_32_49
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(47270..47824)
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Uncharacterized protein involved in biosynthesis of c-type cytochromes n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIS4_9BURK
cytochrome C biogenesis protein; K02200 cytochrome c-type biogenesis protein CcmH Tax=CG_Rhodof_03
cytochrome C biogenesis protein
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cn_combo_scaffold_32_50
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(47817..48338)
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Periplasmic protein thiol--disulfide oxidoreductase DsbE n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0ULE9_ALCFA
periplasmic protein thiol/disulfide oxidoreductase DsbE; K02199 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE Tax=GWA2_Gallionellales_60_142_curated
ccmG; cytochrome c biogenesis protein
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cn_combo_scaffold_32_51
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(48397..50376)
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Cytochrome c heme lyase subunit CcmF n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI48_9PROT
cytochrome c-type biogenesis protein CcmF; K02198 cytochrome c-type biogenesis protein CcmF Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
cytochrome c-type biogenesis protein CcmF
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cn_combo_scaffold_32_52
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(50373..50840)
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Cytochrome c-type biogenesis protein CcmE n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMP3_ACCPU
Cytochrome c-type biogenesis protein ccmE; K02197 cytochrome c-type biogenesis protein CcmE Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
CcmE/CycJ protein
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cn_combo_scaffold_32_53
unknown
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Not on your lists |
comp(50837..50950)
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This feature has no annotations |
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cn_combo_scaffold_32_54
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(50992..51741)
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Heme exporter protein CcmC n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADK5_9PROT
heme exporter protein CcmC
Heme exporter protein CcmC {ECO:0000313|EMBL:BAN36538.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella d
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cn_combo_scaffold_32_55
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(51787..52434)
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Heme exporter protein B n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VJT0_POLNA
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662
heme exporter protein CcmB
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cn_combo_scaffold_32_56
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(52446..53060)
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Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; Ta
Probable heme exporter protein A n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KCJ6_AZOSB
ccmA; cytochrome c biogenesis protein CcmA
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cn_combo_scaffold_32_57
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
53366..54211
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Transcriptional regulator, AraC family n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HR27_RUBGI
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:BAL95464.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus
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cn_combo_scaffold_32_58
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
54369..55331
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Cytochrome C family protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP72_9BURK
Cytochrome C family protein {ECO:0000313|EMBL:EGJ10140.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = A
mtrA; decaheme cytochrome c MtrA/PioA
rbh
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cn_combo_scaffold_32_59
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
55353..58187
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Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP71_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10139.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC
mtrB; outer membrane protein MtrB/PioB
rbh
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cn_combo_scaffold_32_60
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
58187..58828
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Cytochrome c class I n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP70_9BURK
Cytochrome c class I {ECO:0000313|EMBL:EGJ10138.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA
cytochrome c4
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