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cn_combo_scaffold_32

Alias: RUB134_3

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Displaying items 61-90 of 220 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_32_61
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58857..59609
DNA (753bp) protein (251aa)
Cytochrome c class I n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2DXC1_9GAMM
Cytochrome c class I {ECO:0000313|EMBL:EGV33475.1}; Flags: Precursor;; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thio
cytochrome c4
cn_combo_scaffold_32_62
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59659..62253)
DNA (2595bp) protein (865aa)
clpB; ATP-dependent Clp protease ATP-binding subunit ClpB (EC:3.4.21.-)
ATP-dependent Clp protease ATP-binding subunit ClpB n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUA5_RUBGI
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 1
cn_combo_scaffold_32_63
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62567..62905
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036B13B5
ArsR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
regulatory protein ArsR
cn_combo_scaffold_32_64
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62974..63492
DNA (519bp) protein (173aa)
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Acidovorax sp. KKS102 RepID=K0ID89_9BURK
protein-tyrosine phosphatase, low molecular weight Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
protein-tyrosine phosphatase, low molecular weight
cn_combo_scaffold_32_65
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63511..63876
DNA (366bp) protein (122aa)
Arsenical resistance operon trans-acting repressor n=1 Tax=Azoarcus sp. KH32C RepID=H0Q4L4_9RHOO
arsD; arsenical resistance operon trans-acting repressor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
arsD; arsenical resistance operon trans-acting repressor
cn_combo_scaffold_32_66
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63926..65737
DNA (1812bp) protein (604aa)
arsenical pump-driving ATPase; K01551 arsenite-transporting ATPase [EC:3.6.3.16] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
Arsenical pump-driving ATPase n=1 Tax=Thauera sp. 63 RepID=N6XGJ9_9RHOO
arsenical pump-driving ATPase
cn_combo_scaffold_32_67
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65724..66836
DNA (1113bp) protein (371aa)
Arsenical-resistance protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQG4_POLNA
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
arsenical-resistance protein
cn_combo_scaffold_32_68
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66841..67407)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW35_9BURK
flavin reductase Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
flavin reductase
cn_combo_scaffold_32_69
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67404..67913)
DNA (510bp) protein (170aa)
molybdenum cofactor biosynthesis protein MoaE n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B62B16
Molybdopterin converting factor, large subunit {ECO:0000313|EMBL:EHR71330.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkhold
molybdopterin biosynthesis MoaE protein
cn_combo_scaffold_32_70
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67922..68173)
DNA (252bp) protein (84aa)
Molybdopterin synthase subunit MoaD n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SG18_METPP
Sulfur carrier protein MoaD {ECO:0000313|EMBL:EWS53500.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
molybdopterin synthase subunit MoaD
cn_combo_scaffold_32_71
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68170..69414)
DNA (1245bp) protein (415aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Molybdenum cofactor synthesis domain-containing protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW32_9BURK
moeA; molybdopterin biosynthesis protein MoeA
cn_combo_scaffold_32_72
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69430..70839)
DNA (1410bp) protein (470aa)
thrC; threonine synthase ThrC (EC:4.2.3.1)
Threonine synthase {ECO:0000313|EMBL:EGJ12549.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EGJ12549.1};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="
Threonine synthase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW31_9BURK
cn_combo_scaffold_32_73
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70836..72173)
DNA (1338bp) protein (446aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;
hom; homoserine dehydrogenase Hom (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW30_9BURK
cn_combo_scaffold_32_74
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72249..73481)
DNA (1233bp) protein (411aa)
Aminotransferase AlaT {ECO:0000313|EMBL:EGJ12547.1}; EC=2.6.1.2 {ECO:0000313|EMBL:EGJ12547.1};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" sourc
Aminotransferase AlaT n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW29_9BURK
aminotransferase
cn_combo_scaffold_32_75
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73548..73973
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW28_9BURK
hypothetical protein; K09008 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
cn_combo_scaffold_32_76
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74086..74562
DNA (477bp) protein (159aa)
Putative bacterioferritin comigratory oxidoreductase protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SG11_METPP
bacterioferritin comigratory oxidoreductase
Putative bacterioferritin comigratory oxidoreductase protein {ECO:0000313|EMBL:ABM94500.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="
cn_combo_scaffold_32_77
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74679..76433
DNA (1755bp) protein (585aa)
PhoH family protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIA8_9BURK
PhoH family protein {ECO:0000313|EMBL:EHR71321.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
PhoH family protein
cn_combo_scaffold_32_78
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76501..78426)
DNA (1926bp) protein (642aa)
Propionate--CoA ligase PrpE {ECO:0000313|EMBL:BAL96604.1}; EC=6.2.1.17 {ECO:0000313|EMBL:BAL96604.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;
prpE; propionate--CoA ligase PrpE (EC:6.2.1.17) rbh
Propionyl-CoA synthetase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRW9_9BURK
cn_combo_scaffold_32_79
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78692..79333
DNA (642bp) protein (214aa)
NLP/P60 protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRX1_9BURK
NLP/P60 protein {ECO:0000313|EMBL:EGJ11089.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;
putative C40 family peptidase
cn_combo_scaffold_32_80
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79374..80513
DNA (1140bp) protein (380aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_012
Cyclic pyranopterin monophosphate synthase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VMX4_POLNA
moaA; molybdenum cofactor biosynthesis protein A
cn_combo_scaffold_32_81
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80532..83618)
DNA (3087bp) protein (1029aa)
Acriflavin resistance protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRX5_9BURK
Acriflavin resistance protein {ECO:0000313|EMBL:EGJ11093.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 =
transporter, AcrB/D/F family protein
cn_combo_scaffold_32_82
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83681..84943)
DNA (1263bp) protein (421aa)
RND family efflux transporter, MFP subunit n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIA0_9BURK
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EHR71313.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderia
RND family efflux transporter MFP subunit
cn_combo_scaffold_32_83
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85068..85505)
DNA (438bp) protein (146aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRX7_9BURK
cn_combo_scaffold_32_84
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85502..86266)
DNA (765bp) protein (255aa)
Putative methyltransferase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUC6_RUBGI
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:BAL96613.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC
cn_combo_scaffold_32_85
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86292..87062
DNA (771bp) protein (257aa)
gloB; hydroxyacylglutathione hydrolase GloB (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000
Hydroxyacylglutathione hydrolase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUC7_RUBGI
cn_combo_scaffold_32_86
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87059..88729
DNA (1671bp) protein (557aa)
membrane-bound lytic murein transglycosylase D (EC:3.2.1.-); K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
membrane-bound lytic murein transglycosylase D (EC:3.2.1.-)
Membrane-bound lytic murein transglycosylase D (Fragment) n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSB1_9BURK
cn_combo_scaffold_32_87
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88759..89082)
DNA (324bp) protein (108aa)
heme biosynthesis protein HemY n=1 Tax=Ideonella sp. B508-1 RepID=UPI000348CF11
iron-sulfur cluster assembly protein IscA
Iron-sulfur cluster assembly protein IscA {ECO:0000313|EMBL:ACB33314.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii
cn_combo_scaffold_32_88
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89102..90289)
DNA (1188bp) protein (396aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=864051 species="Bacteria
iscS; cysteine desulfurase IscS (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIR7_9BURK
cn_combo_scaffold_32_89
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90321..90854)
DNA (534bp) protein (178aa)
Iron-sulfur cluster assembly transcription factor IscR n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIR8_9BURK
BadM/Rrf2 family transcriptional regulator; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
BadM/Rrf2 family transcriptional regulator
cn_combo_scaffold_32_90
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91005..91997)
DNA (993bp) protein (331aa)
Transcriptional regulator, LysR family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFV0_METPP
LysR family transcriptional regulator
HTH-type transcriptional activator CmpR {ECO:0000313|EMBL:EWS53147.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.
Displaying items 61-90 of 220 in total

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