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NECEvent2014_2_3_scaffold_122

Alias: 172_003_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_122_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(512..2899)
DNA (2388bp) protein (796aa)
Putative K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporting P-type ATPase {ECO:0000313|EMBL:CAJ67135.1}; EC=3.6.3.5 {ECO:0000313|EMBL:CAJ67135.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridi
cadA: cadmium, zinc and cobalt-transporting ATPase (EC:3.6.3.3 3.6.3.5)
Cadmium-translocating P-type ATPase n=27 Tax=Clostridium difficile RepID=T3IMB0_CLODC rbh
NECEvent2014_2_3_scaffold_122_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2922..3287)
DNA (366bp) protein (122aa)
ArsR-family transcriptional regulator n=208 Tax=Clostridium difficile RepID=C9XJ89_CLODC
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CCL22805.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_122_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3486..4334
DNA (849bp) protein (283aa)
Uncharacterized protein n=31 Tax=Clostridium difficile RepID=T3IL88_CLODC rbh
putative spore coat assembly asparagine-richprotein
Putative spore coat assembly asparagine-richprotein {ECO:0000313|EMBL:CEJ96827.1}; Spore coat assembly asparagine-rich protein {ECO:0000313|EMBL:CKH74910.1}; TaxID=1496 species="Bacteria; Firmicutes;
NECEvent2014_2_3_scaffold_122_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4771..5859)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=166 Tax=Clostridium difficile RepID=T3IHK5_CLODC rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ34585.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_122_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5984..6712
DNA (729bp) protein (243aa)
Putative hydrolase, HAD superfamily, subfamily IB {ECO:0000313|EMBL:CCK99356.1}; EC=3.1.3.- {ECO:0000313|EMBL:CCK99356.1};; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pept
HAD phosphoserine phosphatase-like hydrolase, IB family protein n=221 Tax=Clostridium difficile RepID=C9XJ86_CLODC rbh
phosphoserine phosphatase
NECEvent2014_2_3_scaffold_122_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6914..7405)
DNA (492bp) protein (164aa)
Uncharacterized protein n=181 Tax=Clostridium difficile RepID=G6BSY2_CLODI rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EQG78505.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_122_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7416..7859)
DNA (444bp) protein (148aa)
Uncharacterized protein n=81 Tax=Clostridium difficile RepID=G6B2I2_CLODI rbh
hypothetical protein
Putative 'four-disulfide core' protein {ECO:0000313|EMBL:EQG78648.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_122_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7849..8688)
DNA (840bp) protein (280aa)
Uncharacterized protein n=198 Tax=Clostridium difficile RepID=C9XJ83_CLODC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL22625.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_122_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8907..10292)
DNA (1386bp) protein (462aa)
putative glutamate carboxypeptidase (EC:3.5.1.-)
Aminobenzoyl-glutamate utilization protein {ECO:0000313|EMBL:CKH75129.1}; Putative glutamate carboxypeptidase {ECO:0000313|EMBL:CEJ96821.1}; EC=3.5.1.- {ECO:0000313|EMBL:CEJ96821.1};; TaxID=1496 speci
Amidohydrolase family protein n=6 Tax=Clostridium difficile RepID=T3ILM9_CLODC rbh
NECEvent2014_2_3_scaffold_122_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10465..11208)
DNA (744bp) protein (248aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=T3IGI5_CLODC rbh
hypothetical protein
Uncharacterised protein, DUF1355 family {ECO:0000313|EMBL:CAJ67126.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_122_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11228..12490)
DNA (1263bp) protein (421aa)
argE; Acetylornithine deacetylase ArgE (EC:3.5.1.16)
Acetylornithine deacetylase {ECO:0000313|EMBL:CKH75202.1}; EC=3.5.1.- {ECO:0000313|EMBL:CKH75202.1};; Acetylornithine deacetylase ArgE {ECO:0000313|EMBL:CEJ96819.1}; EC=3.5.1.16 {ECO:0000313|EMBL:CEJ9
Peptidase, ArgE/DapE family protein n=8 Tax=Clostridium difficile RepID=T3IHW3_CLODC rbh
NECEvent2014_2_3_scaffold_122_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12674..13672)
DNA (999bp) protein (333aa)
Branched-chain amino acid transport system / permease component family protein n=5 Tax=Clostridium difficile RepID=T3IJI6_CLODC rbh
rbsC; ABC-type transport system, ribose-specificpermease
ABC-type transport system, ribose-specific permease {ECO:0000313|EMBL:CAJ67124.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sou
NECEvent2014_2_3_scaffold_122_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13656..15167)
DNA (1512bp) protein (504aa)
rbsA; ABC-type transport system, ribose-specificATP-binding protein (EC:3.6.3.-)
ABC-type transport system, ribose-specificATP-binding protein {ECO:0000313|EMBL:CEJ96817.1}; EC=3.6.3.- {ECO:0000313|EMBL:CEJ96817.1};; Ribose ABC transporter%2C ATP-binding protein {ECO:0000313|EMBL:
ABC transporter family protein n=3 Tax=Clostridium difficile RepID=T3IMV4_CLODC rbh
NECEvent2014_2_3_scaffold_122_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15221..16183)
DNA (963bp) protein (321aa)
D-ribose ABC transporter, substrate-binding protein n=176 Tax=Clostridium difficile RepID=C9XJ75_CLODC rbh
D-ribose ABC transporter substrate-binding protein
ABC-type transport system, ribose-specific extracellular solute-binding protein {ECO:0000313|EMBL:CCL30044.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococca
NECEvent2014_2_3_scaffold_122_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16231..17121)
DNA (891bp) protein (297aa)
rbsK; Ribokinase, pfkB family (EC:2.7.1.15)
Ribokinase {ECO:0000313|EMBL:CKH75341.1}; EC=2.7.1.15 {ECO:0000313|EMBL:CKH75341.1};; Ribokinase, pfkB family {ECO:0000313|EMBL:CEJ96815.1}; EC=2.7.1.15 {ECO:0000313|EMBL:CEJ96815.1};; TaxID=1496 spec
Ribokinase n=8 Tax=Clostridium difficile RepID=T3IGH8_CLODC rbh
NECEvent2014_2_3_scaffold_122_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17163..18185)
DNA (1023bp) protein (341aa)
Sugar-binding domain protein n=2 Tax=Clostridium difficile RepID=G6BSZ2_CLODI rbh
Sugar-binding domain protein {ECO:0000313|EMBL:EHJ34597.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium d
rbsR; ribose operon repressor
NECEvent2014_2_3_scaffold_122_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18405..19382)
DNA (978bp) protein (326aa)
bioB; biotin synthase (EC:2.8.1.6)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1151391 species="Bacteria; Firmicu
Biotin synthase n=127 Tax=Clostridium difficile RepID=BIOB_CLOD6 rbh
NECEvent2014_2_3_scaffold_122_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19588..19851)
DNA (264bp) protein (88aa)
Uncharacterized protein n=194 Tax=Clostridium difficile RepID=C9XJ71_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK99343.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_122_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19921..20994)
DNA (1074bp) protein (358aa)
4Fe-4S binding domain protein n=197 Tax=Clostridium difficile RepID=C9XJ70_CLODC rbh
iron-sulfur-binding protein
Iron-sulfur-binding protein {ECO:0000313|EMBL:CKH75477.1}; Putative iron-sulfur-binding protein {ECO:0000313|EMBL:CDS83349.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pept
NECEvent2014_2_3_scaffold_122_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21242..22000)
DNA (759bp) protein (253aa)
ABC-2 transporter family protein n=122 Tax=Clostridium difficile RepID=T3IJP6_CLODC rbh
ABC-type transportsystem,bacitracin/multidrug-family permease
ABC transporter permease {ECO:0000313|EMBL:CKH75509.1}; ABC-type transportsystem,bacitracin/multidrug-family permease {ECO:0000313|EMBL:CEJ96810.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridi
NECEvent2014_2_3_scaffold_122_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21997..22917)
DNA (921bp) protein (307aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CKH75534.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKH75534.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
ABC-type transportsystem,bacitracin/multidrug-family ATP-binding protein (EC:3.6.3.30)
ABC transporter family protein n=20 Tax=Clostridium difficile RepID=T3IN21_CLODC rbh
NECEvent2014_2_3_scaffold_122_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22914..23114)
DNA (201bp) protein (67aa)
Phospholipase D/nuclease family protein n=201 Tax=Clostridium difficile RepID=T3ILT5_CLODC
uncharacterised protein
Negative regulatory protein yxlE {ECO:0000313|EMBL:CKH75564.1}; Uncharacterised protein {ECO:0000313|EMBL:CEJ96808.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS83449.1}; TaxID=1496 species="Bacter
NECEvent2014_2_3_scaffold_122_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23119..24213)
DNA (1095bp) protein (365aa)
Helix-turn-helix family protein n=156 Tax=Clostridium difficile RepID=T3IGQ0_CLODC rbh
Transcriptional regulator, HTH-type
Transcriptional regulator, HTH-type {ECO:0000313|EMBL:CCL22472.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost
NECEvent2014_2_3_scaffold_122_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25039..25158)
DNA (120bp) protein (40aa)
Uncharacterized protein n=33 Tax=Clostridium difficile RepID=G6BT00_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE70243.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_122_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25175..26482)
DNA (1308bp) protein (436aa)
putative peptidase, M20A family (EC:3.5.1.-)
Peptidase {ECO:0000313|EMBL:CKH75642.1}; EC=3.4.13.- {ECO:0000313|EMBL:CKH75642.1};; Putative peptidase, M20A family {ECO:0000313|EMBL:CEJ96806.1}; EC=3.5.1.- {ECO:0000313|EMBL:CEJ96806.1};; TaxID=149
Dipeptidase family protein n=50 Tax=Clostridium difficile RepID=T2TQM3_CLODI rbh
NECEvent2014_2_3_scaffold_122_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26547..27026)
DNA (480bp) protein (160aa)
L-2-amino-thiazoline-4-carboxylic acid hydrolase family protein n=199 Tax=Clostridium difficile RepID=C9XJ65_CLODC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL22386.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_122_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27073..27936)
DNA (864bp) protein (288aa)
PTS system mannose/fructose/sorbose IID component family protein n=185 Tax=Clostridium difficile RepID=T3ILX5_CLODC rbh
PTS system, mannose/fructose/sorbose IIDcomponent
PTS system, mannose/fructose/sorbose IID component {ECO:0000313|EMBL:CCL22385.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sou
NECEvent2014_2_3_scaffold_122_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27936..28691)
DNA (756bp) protein (252aa)
PTS system sorbose-specific iic component family protein n=213 Tax=Clostridium difficile RepID=C9XJ63_CLODC rbh
PTS system transporter subunit IIC
PTS system sorbose-specific iic component family protein {ECO:0000313|EMBL:EQG78749.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.
NECEvent2014_2_3_scaffold_122_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28718..29206)
DNA (489bp) protein (163aa)
PTS system, mannose/fructose/sorbose IIB component {ECO:0000313|EMBL:CCL30030.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CCL30030.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pe
PTS system sorbose subIIB component family protein n=200 Tax=Clostridium difficile RepID=C9XJ62_CLODC rbh
PTS system transporter subunit IIB
NECEvent2014_2_3_scaffold_122_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29224..29625)
DNA (402bp) protein (134aa)
PTS system fructose IIA component family protein n=187 Tax=Clostridium difficile RepID=C9XJ61_CLODC
PTS system, IIa component
PTS system, mannose/fructose/sorbose IIA component {ECO:0000313|EMBL:CAJ67108.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sour
Displaying items 1-30 of 41 in total

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