ggKbase home page

NECEvent2014_3_4_scaffold_327

Alias: 173_002_scaffold_327

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_327_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1070)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTS3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30835.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
membrane protein
NECEvent2014_3_4_scaffold_327_2
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1067..2263)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G1W2_CLOPA rbh
Uncharacterized protein {ECO:0000313|EMBL:ETD69943.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-59
hypothetical protein
NECEvent2014_3_4_scaffold_327_3
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2247..3443)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G0A6_CLOPA rbh
Uncharacterized protein {ECO:0000313|EMBL:ETD69944.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-59
hypothetical protein
NECEvent2014_3_4_scaffold_327_4
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3457..4617)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G0I7_CLOPA rbh
Uncharacterized protein {ECO:0000313|EMBL:ETD69945.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-59
glycosyl transferase family 2
NECEvent2014_3_4_scaffold_327_5
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4633..5886)
DNA (1254bp) protein (418aa)
ABC transporter n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G1I9_CLOPA rbh
ABC transporter {ECO:0000313|EMBL:ETD69946.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
ABC transporter
NECEvent2014_3_4_scaffold_327_6
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5901..7268)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G2R1_CLOPA rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL
ABC-2 type transporter
NECEvent2014_3_4_scaffold_327_7
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7288..8373)
DNA (1086bp) protein (362aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Mannose-1-phosphate guanylyltransferase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G1X8_CLOPA rbh
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:ETD69948.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteu
NECEvent2014_3_4_scaffold_327_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8395..9234)
DNA (840bp) protein (280aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KJZ84797.1}; EC=1.1.1.133 {ECO:0000313|EMBL:KJZ84797.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JPD6_CLOBU rbh
NECEvent2014_3_4_scaffold_327_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9247..10212)
DNA (966bp) protein (322aa)
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase {ECO:0000313|EMBL:KJZ84794.1}; EC=2.4.1.- {ECO:0000313|EMBL:KJZ84794.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
WsbC n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JN25_CLOBU rbh
glycosyl transferase family protein
NECEvent2014_3_4_scaffold_327_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10199..11218)
DNA (1020bp) protein (340aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
dTDP-glucose 4,6-dehydratase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9J0_CLOBU rbh
dTDP-glucose 4,6-dehydratase
NECEvent2014_3_4_scaffold_327_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11245..11856)
DNA (612bp) protein (204aa)
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase RfbC (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KHT5_CLOBU rbh
Choline binding protein A {ECO:0000313|EMBL:KJZ97585.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_3_4_scaffold_327_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11828..12709)
DNA (882bp) protein (294aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
rmlA4; glucose-1-phosphate thymidylyltransferase RmlA (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDV0_CLOBU rbh
NECEvent2014_3_4_scaffold_327_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13157..14578
DNA (1422bp) protein (474aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JPD1_CLOBU rbh
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:KJZ84811.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s
undecaprenyl-phosphate galactose phosphotransferase
NECEvent2014_3_4_scaffold_327_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14664..14993
DNA (330bp) protein (110aa)
UPI0003D5E62D related cluster n=1 Tax=unknown RepID=UPI0003D5E62D
Uncharacterized protein {ECO:0000313|EMBL:ETI91851.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_3_4_scaffold_327_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15021..15170)
DNA (150bp) protein (50aa)
UPI0003D63A4F related cluster n=1 Tax=unknown RepID=UPI0003D63A4F
HEPN protein {ECO:0000313|EMBL:ETI91853.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
HEPN domain-containing protein
NECEvent2014_3_4_scaffold_327_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15505..17352
DNA (1848bp) protein (616aa)
O-antigen polymerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9I6_CLOBU rbh
WsaB {ECO:0000313|EMBL:KJZ84809.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
O-antigen ligase
NECEvent2014_3_4_scaffold_327_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17508..19109)
DNA (1602bp) protein (534aa)
UPI0003D68F1B related cluster n=1 Tax=unknown RepID=UPI0003D68F1B rbh
Collagenolytic protease {ECO:0000313|EMBL:ETI91857.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
collagenolytic protease
NECEvent2014_3_4_scaffold_327_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19378..21123)
DNA (1746bp) protein (582aa)
UPI0003D5A729 related cluster n=1 Tax=unknown RepID=UPI0003D5A729 rbh
CspD {ECO:0000313|EMBL:ETI91858.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_3_4_scaffold_327_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21505..23388)
DNA (1884bp) protein (628aa)
Surface protein PspC n=2 Tax=Clostridium butyricum RepID=B1QWN0_CLOBU rbh
CspC {ECO:0000313|EMBL:EEP55831.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
cell wall binding repeat-containing protein
NECEvent2014_3_4_scaffold_327_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23545..24093)
DNA (549bp) protein (183aa)
Lytic amidase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JPC1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84803.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
cell wall binding repeat-containing protein
NECEvent2014_3_4_scaffold_327_21
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24284..24526)
DNA (243bp) protein (81aa)
CspC n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JN14_CLOBU
Choline binding protein A {ECO:0000313|EMBL:KJZ85177.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
cell wall binding repeat-containing protein
Displaying 21 items

View Taxonomy