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NECEvent2014_4_3_scaffold_160

Alias: 174_003_scaffold_160

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_160_trna_1
unknown

Not on your lists

24..96
DNA (73bp)
transferRNA
NECEvent2014_4_3_scaffold_160_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

345..875
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R805_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT23605.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_4_3_scaffold_160_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1226..3982
DNA (2757bp) protein (919aa)
UPF0182 protein CPF_0011 n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Y011_CLOP1 rbh
UPF0182 protein CPF_0011 {ECO:0000255|HAMAP-Rule:MF_01600}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai
hypothetical protein
NECEvent2014_4_3_scaffold_160_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4225..5619
DNA (1395bp) protein (465aa)
FAD-dependent oxidoreductase n=2 Tax=Clostridium perfringens RepID=Q0TV55_CLOP1 rbh
FAD-dependent oxidoreductase
FAD-dependent oxidoreductase {ECO:0000313|EMBL:EDT23602.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str.
NECEvent2014_4_3_scaffold_160_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5632..5865
DNA (234bp) protein (78aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CRG1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26687.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_4_3_scaffold_160_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6217..7494
DNA (1278bp) protein (426aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=9 Tax=Clostridium perfringens RepID=SYS_CLOPE rbh
NECEvent2014_4_3_scaffold_160_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7671..8090
DNA (420bp) protein (140aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=Q8XPE8_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23572.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_4_3_scaffold_160_trna_2
unknown

Not on your lists

8232..8319
DNA (88bp)
transferRNA
NECEvent2014_4_3_scaffold_160_trna_3
unknown

Not on your lists

8356..8443
DNA (88bp)
transferRNA
NECEvent2014_4_3_scaffold_160_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8665..8973
DNA (309bp) protein (103aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CRG4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18695.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_3_scaffold_160_trna_4
unknown

Not on your lists

9082..9169
DNA (88bp)
transferRNA
NECEvent2014_4_3_scaffold_160_trna_5
unknown

Not on your lists

9178..9265
DNA (88bp)
transferRNA
NECEvent2014_4_3_scaffold_160_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9303..9485)
DNA (183bp) protein (61aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CRG5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23624.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_4_3_scaffold_160_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9723..10604
DNA (882bp) protein (294aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CRG6_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79724.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_3_scaffold_160_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10693..10857)
DNA (165bp) protein (55aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CRG7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26666.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_4_3_scaffold_160_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11066..14542
DNA (3477bp) protein (1159aa)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044573}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044602};; EC=3.
ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R814_CLOPF rbh
addB; ATP-dependent nuclease subunit B
NECEvent2014_4_3_scaffold_160_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14532..18347
DNA (3816bp) protein (1272aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {E
ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R815_CLOPF rbh
addA; ATP-dependent nuclease subunit A
NECEvent2014_4_3_scaffold_160_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18446..19714)
DNA (1269bp) protein (423aa)
PolyA polymerase family protein n=1 Tax=Clostridium perfringens F262 RepID=H7CRH0_CLOPF rbh
PolyA polymerase family protein {ECO:0000313|EMBL:EIA18701.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F26
poly(A) polymerase
NECEvent2014_4_3_scaffold_160_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19830..20822
DNA (993bp) protein (331aa)
3'-5' exoribonuclease YhaM {ECO:0000313|EMBL:EDT71806.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDT71806.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
3'-5' exoribonuclease YhaM n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2U9_CLOPF rbh
CMP-binding factor
NECEvent2014_4_3_scaffold_160_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20854..22014)
DNA (1161bp) protein (387aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHA5_CLOPF rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EDT26699.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
ErfK/YbiS/YcfS/YnhG family protein
NECEvent2014_4_3_scaffold_160_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22206..23426
DNA (1221bp) protein (407aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:M
pepT; peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHA4_CLOPF rbh
NECEvent2014_4_3_scaffold_160_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23532..24407)
DNA (876bp) protein (292aa)
DegV family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TV41_CLOP1 rbh
degV family protein
DegV domain-containing protein CPE0026; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
NECEvent2014_4_3_scaffold_160_trna_6
unknown

Not on your lists

24597..24670
DNA (74bp)
transferRNA
NECEvent2014_4_3_scaffold_160_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24844..25983
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CRH5_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA18706.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_3_scaffold_160_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26173..27057)
DNA (885bp) protein (295aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00093350};; TaxID=883064
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RS83_CLOPF rbh
Displaying 25 items

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