name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_2910_curated_1
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..343)
|
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase n=1 Tax=Rhizobium sp. CF080 RepID=J2S605_9RHIZ
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:CDN56935.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Rieske (2Fe-2S) iron-sulfur domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1706..2083
|
Putative exported protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QMJ3_BORBO
Uncharacterized protein {ECO:0000313|EMBL:KIZ47879.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2167..2586)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMZ6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KIZ47851.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2586..3755)
|
thiolase n=1 Tax=Amorphus coralli RepID=UPI0003612FD0
Uncharacterized protein {ECO:0000313|EMBL:KIZ47850.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
thiolase
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3783..4541)
|
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000370D27D
Enoyl-CoA hydratase {ECO:0000313|EMBL:KIZ47878.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
enoyl-CoA hydratase
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4681..5343)
|
Transcriptional regulator, TetR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJX3_NITHX
Uncharacterized protein {ECO:0000313|EMBL:KIZ47849.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
TetR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5613..6413
|
ABC transporter ATP-binding protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QFL0_BORBO
Uncharacterized protein {ECO:0000313|EMBL:KIZ40757.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
ABC transporter ATP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6410..7195
|
Putative membrane protein n=2 Tax=Bordetella RepID=K0M811_BORPB
ABC transporter permease {ECO:0000313|EMBL:KIZ40758.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7244..8812
|
AMP-binding protein n=1 Tax=Burkholderia bryophila RepID=UPI000378B4B7
Uncharacterized protein {ECO:0000313|EMBL:KIZ40759.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
AMP-binding domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9404..11161
|
ATPase n=1 Tax=Afipia birgiae RepID=UPI00030EA5FA
Uncharacterized protein {ECO:0000313|EMBL:EKS42889.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K06915
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11258..11839
|
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Alkylhydroperoxidase AhpD family core domain-containing protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PN95_9BRAD
peroxidase-like protein
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_12
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11866..12330
|
Putative magnesium transporter n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QLN3_9BRAD
Putative magnesium transporter {ECO:0000313|EMBL:EGP07886.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12327..12950)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHZ2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42237.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ParB-like nuclease
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13187..13498
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKZ3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42236.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13657..13938
|
Acyl carrier protein n=5 Tax=Bradyrhizobiaceae RepID=F7QLN1_9BRAD
Acyl carrier protein AcpXL {ECO:0000313|EMBL:EKS42235.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
acyl carrier protein
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_16
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13948..14421
|
(3R)-hydroxymyristoyl-(Acyl carrier protein) dehydratase {ECO:0000313|EMBL:EGP07883.1}; EC=4.2.1.- {ECO:0000313|EMBL:EGP07883.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
beta-hydroxyacyl-dehydratase; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]
3-hydroxyacyl-ACP dehydratase n=1 Tax=Afipia birgiae RepID=UPI000302EAC4
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_17
unknown
|
Not on your lists |
comp(14384..14917)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15220..15609
|
3-oxoacyl-(acyl carrier protein) synthase II; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PV60_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42233.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15624..15959
|
3-oxoacyl-(acyl carrier protein) synthase II; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
Beta-ketoacyl synthase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q216M4_RHOPB
Beta-ketoacyl synthase {ECO:0000313|EMBL:ABD87662.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_20
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16277..16864
|
3-oxoacyl-ACP synthase (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-ACP synthase n=1 Tax=Afipia birgiae RepID=UPI0003028714
Uncharacterized protein {ECO:0000313|EMBL:EKS42882.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16987..18009
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKY7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42231.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
alcohol dehydrogenase zinc-binding domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18434..18901
|
lauroyl/myristoyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PRU6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42230.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18902..20020)
|
putrescine/spermidine ABC transporter substrate-binding protein n=1 Tax=Afipia birgiae RepID=UPI000318CC30
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
potF; putrescine ABC transporter periplasmic binding protein; K11073 putrescine transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20034..21185)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PV44_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42228.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21193..21516)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHV0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42227.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21650..23578)
|
Probable potassium transport system protein kup n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKX1_9BRAD
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
kup; Kup family low affinity potassium transporter; K03549 KUP system potassium uptake protein
|
|
SCNpilot_expt_1000_bf_scaffold_2910_curated_27
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23796..24545)
|
Probable potassium transport system protein kup n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PMP6_9BRAD
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
low affinity potassium transporter; K03549 KUP system potassium uptake protein
|