ggKbase home page

SCNpilot_cont_300_bf_scaffold_87_curated

Search features with annotation key words

Displaying items 211-240 of 1758 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_87_curated_211
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

215795..216562
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EM05_METSB
short-chain dehydrogenase/reductase SDR; K07124
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACK50786.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_300_bf_scaffold_87_curated_212
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

216659..217396
DNA (738bp) protein (246aa)
glutamine amidotransferase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003724230
Glutamine amidotransferase class-I {ECO:0000313|EMBL:ACK50787.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_300_bf_scaffold_87_curated_213
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(217463..217993)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00035E0D26
Uncharacterized protein {ECO:0000313|EMBL:EJW13132.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
SCP-like extracellular protein
SCNpilot_cont_300_bf_scaffold_87_curated_214
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(217994..220378)
DNA (2385bp) protein (795aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000367CBC4
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ACK49426.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_300_bf_scaffold_87_curated_215
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(220443..221543)
DNA (1101bp) protein (367aa)
lysine 2,3-aminomutase YodO family protein (EC:5.4.3.2); K01843 lysine 2,3-aminomutase [EC:5.4.3.2]
Lysine 2,3-aminomutase YodO family protein {ECO:0000313|EMBL:ACK49427.1}; EC=5.4.3.2 {ECO:0000313|EMBL:ACK49427.1};; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
Lysine 2,3-aminomutase YodO family protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EJM3_METSB
SCNpilot_cont_300_bf_scaffold_87_curated_216
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(221594..222637)
DNA (1044bp) protein (348aa)
Lysyl-tRNA synthetase-like protein GenX n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z013_9RHIZ
Lysyl-tRNA synthetase-like protein GenX {ECO:0000313|EMBL:EIM29555.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
lysyl-tRNA synthetase-like protein GenX
SCNpilot_cont_300_bf_scaffold_87_curated_217
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

222792..223361
DNA (570bp) protein (190aa)
Elongation factor P n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QP44_METSZ
efp; translation elongation factor P (EF-P)
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_cont_300_bf_scaffold_87_curated_218
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

223399..224286
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031E8EDD
Uncharacterized protein {ECO:0000313|EMBL:ETX07424.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
SCNpilot_cont_300_bf_scaffold_87_curated_219
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(224482..225126)
DNA (645bp) protein (215aa)
maleylacetoacetate isomerase (EC:5.2.1.2); K01800 maleylacetoacetate isomerase [EC:5.2.1.2]
UPI0003CE857D related cluster n=1 Tax=unknown RepID=UPI0003CE857D
Maleylacetoacetate isomerase {ECO:0000313|EMBL:ESY70933.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_cont_300_bf_scaffold_87_curated_220
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(225130..226149)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TVT1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE10569.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
extracellular solute-binding protein family 1; K02012 iron(III) transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_87_curated_221
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

226417..227535
DNA (1119bp) protein (373aa)
Mlr9221 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q981V4_RHILO
hypothetical protein; K07045 rbh
Mlr9221 protein {ECO:0000313|EMBL:BAB54605.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_300_bf_scaffold_87_curated_222
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

227532..228644
DNA (1113bp) protein (371aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Rhizobium sp. CF080 RepID=J3BRY9_9RHIZ
Hydrolase {ECO:0000313|EMBL:KGE00878.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_87_curated_223
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

228647..229060
DNA (414bp) protein (138aa)
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase n=1 Tax=Rhizobium sp. CF080 RepID=J2RW65_9RHIZ
Rieske (2Fe-2S) iron-sulfur domain-containing protein {ECO:0000313|EMBL:EUB96430.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
putative ferredoxin
SCNpilot_cont_300_bf_scaffold_87_curated_224
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

229241..229990
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002DA8876
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK85577.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
SCNpilot_cont_300_bf_scaffold_87_curated_225
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

230270..232552
DNA (2283bp) protein (761aa)
celA; cellulose synthase (EC:2.4.1.12); K00694 cellulose synthase (UDP-forming) [EC:2.4.1.12]
Cellulose synthase (UDP-forming) {ECO:0000313|EMBL:ACS39039.1}; EC=2.4.1.12 {ECO:0000313|EMBL:ACS39039.1};; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
cellulose synthase n=1 Tax=Methylocystis parvus RepID=UPI00037A78C1
SCNpilot_cont_300_bf_scaffold_87_curated_226
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

232642..235479
DNA (2838bp) protein (946aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002EDC4C7
cellulose synthase subunit B
Cellulose synthase subunit B {ECO:0000313|EMBL:ACL58647.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_300_bf_scaffold_87_curated_227
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

235479..236624
DNA (1146bp) protein (382aa)
cellulase (EC:3.2.1.4); K01179 endoglucanase [EC:3.2.1.4]
Cellulase {ECO:0000313|EMBL:ACK82434.1}; EC=3.2.1.4 {ECO:0000313|EMBL:ACK82434.1};; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002FA846B
SCNpilot_cont_300_bf_scaffold_87_curated_228
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

236609..239254
DNA (2646bp) protein (882aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M835_METRJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB26756.1}; Flags: Precursor;; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_300_bf_scaffold_87_curated_229
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

239257..240423
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI000364808A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB26755.1}; Flags: Precursor;; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_300_bf_scaffold_87_curated_230
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

240569..240838
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002D8F807
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ08296.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_cont_300_bf_scaffold_87_curated_231
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(240839..241849)
DNA (1011bp) protein (337aa)
hypothetical protein; K14333 2,3-dihydroxybenzoate decarboxylase [EC:4.1.1.46]
Aminocarboxymuconate-semialdehyde decarboxylase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U3U7_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCNpilot_cont_300_bf_scaffold_87_curated_232
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241983..242891)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000361095C
hydrolase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCNpilot_cont_300_bf_scaffold_87_curated_233
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(242944..244173)
DNA (1230bp) protein (410aa)
Putative extradiol dioxygenase n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GLQ5_9ACTO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCNpilot_cont_300_bf_scaffold_87_curated_234
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

244466..245242
DNA (777bp) protein (259aa)
Cyclase family protein n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HX92_MYCRH
Cyclase family protein {ECO:0000313|EMBL:EHB55153.1}; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
cyclase family protein
SCNpilot_cont_300_bf_scaffold_87_curated_235
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(245252..245974)
DNA (723bp) protein (241aa)
Invasion associated locus B n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZG9_9BRAD
Invasion associated locus B {ECO:0000313|EMBL:EAQ34619.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
invasion associated locus B
SCNpilot_cont_300_bf_scaffold_87_curated_236
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

246097..248418
DNA (2322bp) protein (774aa)
2-amninobenzoyl-CoA monooxygenase/reductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQ70_RHITR
2-amninobenzoyl-CoA monooxygenase/reductase
2-amninobenzoyl-CoA monooxygenase/reductase {ECO:0000313|EMBL:AGB72230.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_87_curated_237
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

248444..248836
DNA (393bp) protein (131aa)
Endoribonuclease L-PSP n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TMX8_MESCW
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ADV09283.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_300_bf_scaffold_87_curated_238
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

248859..249617
DNA (759bp) protein (253aa)
Putative Granaticin polyketide synthase ketoacyl reductase 1 {ECO:0000313|EMBL:CDX50651.1}; EC=1.3.1.- {ECO:0000313|EMBL:CDX50651.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
UPI0003CE50B9 related cluster n=1 Tax=unknown RepID=UPI0003CE50B9
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_87_curated_239
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

249611..250084
DNA (474bp) protein (158aa)
UPI0003CF8EB0 related cluster n=1 Tax=unknown RepID=UPI0003CF8EB0
Transcriptional regulator {ECO:0000313|EMBL:CDX45730.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_87_curated_240
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

250081..250893
DNA (813bp) protein (271aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TMX6_MESCW
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADV09281.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Displaying items 211-240 of 1758 in total

View Taxonomy