ggKbase home page

SCNpilot_cont_300_bf_scaffold_87_curated_186

Organism: scnpilot_dereplicated_Rhizobiales_2

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(188899..189618)

Top 3 Functional Annotations

Value Algorithm Source
Transcription activator effector binding n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EM15_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 224.0
  • Bit_score: 200
  • Evalue 2.60e-48
transcription activator effector binding protein similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 224.0
  • Bit_score: 200
  • Evalue 8.20e-49
Transcription activator effector binding {ECO:0000313|EMBL:ACK50796.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 224.0
  • Bit_score: 200
  • Evalue 3.70e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylocella silvestris → Methylocella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGAACGTGCCTATGCCTCGGCCCCTTTTTCGGCTGCCCCACTCGCATTTCAGTCTGGCGGTGGCCGCCCTGCTGCTGCTGGCCGCGCCGCTCGCGGCGCAAACGCCGGCTCCCGCGCCACCGGCTTCGCCGGCCGCCCCGGCAACCCCGTCACCACCTTCAGCTTCGCCACCCGCCGACCAGGCGACACCCGCGCCCGCCCCGGTGCCGACGCCACCGGCGCCTTCCGCCGAAGCGGAGAAACCCTCGGGCGATGCGTCCTCGGTCAAGCCGATCGAAATGACCGCCCGTCCGGCCCTGACGTTCTCCGGCAAGGCCGATTGGGACGATGGCTATAAGACGATCATGGAGGCGATCGCCAAACTGCGCGCCGAGGCGAAGCGGGCGGGTTTGAAGGTCACCGGCTATCCGCTGACCGTGTTCCGCTCCACCGACGATGTCGGCTTCCGCTTCGATGCGATGCTGGTGGTCGATCAGCCGCCGGCCGATCCGCAGCTTGGCGCCGATTTCAAGATCATGCAGACGCCGGCGGGCAAAGCAGTGAAATTCGAGCACCGCTCGTCCTATGAGGAAATCGAGTCGACCTATGAGGCGATCACCGCCTGGCTCGACGAGAAGGGCCTCGATTCACGCGACCTCTTCATCGAGGAATATCTCAACGAAGGCAAAGGCTCCGACGATACAGACCTACAGGTCGATATCTACGTCTTCGTGAAATAG
PROTEIN sequence
Length: 240
MNVPMPRPLFRLPHSHFSLAVAALLLLAAPLAAQTPAPAPPASPAAPATPSPPSASPPADQATPAPAPVPTPPAPSAEAEKPSGDASSVKPIEMTARPALTFSGKADWDDGYKTIMEAIAKLRAEAKRAGLKVTGYPLTVFRSTDDVGFRFDAMLVVDQPPADPQLGADFKIMQTPAGKAVKFEHRSSYEEIESTYEAITAWLDEKGLDSRDLFIEEYLNEGKGSDDTDLQVDIYVFVK*