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SCNpilot_cont_300_bf_scaffold_87_curated_187

Organism: scnpilot_dereplicated_Rhizobiales_2

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 189822..190691

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 295.0
  • Bit_score: 353
  • Evalue 3.10e-94
dapF; diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 283.0
  • Bit_score: 333
  • Evalue 5.80e-89
Diaminopimelate epimerase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZ75_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 295.0
  • Bit_score: 353
  • Evalue 2.20e-94

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGAATCCACTCGCGCACCGCCCCTTTTTGAAGATGAACGGCATCGGCAACGAGATCGTCGTTCTCGACCTGCGTGGCACCGGCCTGGCCGTGCGGCCGCAGGACGCGCGCGCCATCGCCCGGGGCGAAGGTCTGGCCTACGACCAGCTCATGGTGCTGGGCGACCCGCATCAGACCGGCGCCGACGCCTTCATGACGATTTTCAACAATGACGGCTCGGAATCCGCCTCCTGCGGCAATGGCACCCGCTGCGTTGCCTGGGCACTGACCCGCGACACCGACCGCGACCGCCTGCGGCTCGAAACCAGCGCCGGCCCGCTCGACATCAGCCGCAACGGCGAGCGCAATTTCACCGTCGACATGGGGCCGCCCCGGCTTGGCTGGCGCGACATCCCGCTACGCGATCCCGTCGACGACACGCGCGCCGTTGCCGTGCCCGATGCCCCGTCCGCCATCCAGGCACTCGGCCCCTTCTCGGCCGCCAGTATGGGCAATCCGCACGCCATCTTCTGGGTGAAGGATGTGGCGGGCGTCGATGTCGCCGGCCTCGGCCCCCAGCTCGAACATCACCCGCTGTTTCCGGCGCGCGCCAATATCTCCTTCGCCGAAATCGTCAGCCGCGATCATATTCGCCTGCGCGTCTGGGAACGTGGCGCCGGCATCACCCAGGCCTGCGGCTCGGCCGCCTGCGCCACGCTCGTCTGCGCCGCCCGCAACGGCTTCACCGGCCGTAGCGCCACCGTCTCCCTGCCTGGTGGCGATCTCGTCATCACCTGGCGCGACGACGACCATGTGCTGATGACCGGCGATGTCGAACTGGAATTCGAAGGCCAGTTCGATCCCGCGCTCTTCACCGAGGCGACCGTATGA
PROTEIN sequence
Length: 290
MNPLAHRPFLKMNGIGNEIVVLDLRGTGLAVRPQDARAIARGEGLAYDQLMVLGDPHQTGADAFMTIFNNDGSESASCGNGTRCVAWALTRDTDRDRLRLETSAGPLDISRNGERNFTVDMGPPRLGWRDIPLRDPVDDTRAVAVPDAPSAIQALGPFSAASMGNPHAIFWVKDVAGVDVAGLGPQLEHHPLFPARANISFAEIVSRDHIRLRVWERGAGITQACGSAACATLVCAARNGFTGRSATVSLPGGDLVITWRDDDHVLMTGDVELEFEGQFDPALFTEATV*