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SCNpilot_expt_1000_bf_scaffold_1502_curated_32

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(36535..37077)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion lipoprotein, VC_A0113 family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDC8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 155.0
  • Bit_score: 242
  • Evalue 2.70e-61
Type VI secretion lipoprotein, VC_A0113 family {ECO:0000313|EMBL:EYR83990.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 155.0
  • Bit_score: 242
  • Evalue 3.70e-61
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 134.0
  • Bit_score: 88
  • Evalue 2.60e-15

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
TTGGGTGTAATGGGATTTGCGGCGCGCGGAGGGCTCCTGCGTGCCGTACCGAAAGGCCTGTCGGTGGCCGCGCGTTTCGTGTTCNNNNNNNNCGGGCTGTTCGGCAAGAAGGACGTGCCGCCGCCGAAGGAGATCGAGATCAAGCCGGCGCCTGCGGCAGCCAGCCTCGATTTCGTCGCGGTCGCCTCGCCATTGGCCAATCCCGGCCCGGACGGCGTGCCGGCGCCCGTCGTCATGCGGCTCTATCAGCTGAATGCCGAAACCAACTTCTCGAATGCGAGTTTTCGCCAGCTTTGGGAAGAGGATGCCAAGACGCTGGGGCCTACCATGCTCGGTAAGACGGAGATTTACCTGACGCCCGGCGGCATCGAGCACGTCAAGGCCAACCTGATCGAGGGCACGAGCATCGTTGCCGTCGTGGTCGGCTTCCGCAATTTCGAAAATGCAAAATGGCGGGCAATGGTCGGCTTGCAGGGCGAGAAGCGCTTCAAGCTGAAGGCCGATCTCAAGACGCTCGCGGTGGATCTGGGTCCGCAGGACTGA
PROTEIN sequence
Length: 181
LGVMGFAARGGLLRAVPKGLSVAARFVFXXXGLFGKKDVPPPKEIEIKPAPAAASLDFVAVASPLANPGPDGVPAPVVMRLYQLNAETNFSNASFRQLWEEDAKTLGPTMLGKTEIYLTPGGIEHVKANLIEGTSIVAVVVGFRNFENAKWRAMVGLQGEKRFKLKADLKTLAVDLGPQD*