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SCNpilot_expt_1000_bf_scaffold_1502_curated_33

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(37068..37766)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMQ0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 249.0
  • Bit_score: 158
  • Evalue 8.50e-36
FHA domain-containing protein {ECO:0000313|EMBL:EYR83989.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 249.0
  • Bit_score: 158
  • Evalue 1.20e-35
fha1; type VI secretion protein Fha1 similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 185.0
  • Bit_score: 87
  • Evalue 7.60e-15

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGGCGCCATTCCGGAAAAGACGCTCGAGGCGGGCAGCATGGTGGTCGGCCGCGCTGCGGAGGCCGACTGGTCGATCCCCGATCCCGAACGCGTTCTCTCCAAGGCGCATTGCCGCATCGACCGCAAGGACGGAGGCTTTTTCCTCACCGATCTTTCGACCAACGGCGTGCGCGTCAACGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGACGCCATCGTCGGCGTGATCATCGAAGATGGCCCGGCCGGGATCGCGGACGTTCCGCCCGCCGCCGCCGAGACCGCCGATCCCTTCCCAGACGGCCCCTTCGGCTTCGATGCCGCTGCTGCTCCGCCACAGGCGCAGGCGCCGCAGGCGGCCGTTTCCGCCGCGCCGGTTGCGGCGCCCGAAACCAGGATCATGCAGGACTGGTGGGATCCGAGTGCAGCTTCGGGCAAGTCCGATGTGCCAGACTGGCGCAATCCCGGACCGGAAAGCGCCGATTCGCCTTCCGTCCCGGCCTCCGCCGCGCATCGGGCTTCAGCGGCGGTAAACGGTATGGAGGATATAGTCATGATGGCTGCCACGGTGGAAAAGGCCGCGCTGATCCGCGCCCTTGACGCCGCGGTTTCAGTGTTGGACGGAGAGCGGGAAAAATTCATGCAGCGGCTTCGCCAGTTGCTCAGCGAGGAGTCGTCGCGTTGGGTGTAA
PROTEIN sequence
Length: 233
MGAIPEKTLEAGSMVVGRAAEADWSIPDPERVLSKAHCRIDRKDGGFFLTDLSTNGVRVNGXXXXXXXXXXXDAIVGVIIEDGPAGIADVPPAAAETADPFPDGPFGFDAAAAPPQAQAPQAAVSAAPVAAPETRIMQDWWDPSAASGKSDVPDWRNPGPESADSPSVPASAAHRASAAVNGMEDIVMMAATVEKAALIRALDAAVSVLDGEREKFMQRLRQLLSEESSRWV*