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SCNpilot_expt_500_bf_scaffold_555_curated_27

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 35966..37393

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 475.0
  • Bit_score: 925
  • Evalue 2.50e-266
leuC; isopropylmalate isomerase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 470.0
  • Bit_score: 654
  • Evalue 2.40e-185
3-isopropylmalate dehydratase large subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAA0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 475.0
  • Bit_score: 925
  • Evalue 1.80e-266

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1428
ATGACCGGCCCGCGCACGCTCTACGACAAGATATGGGACGCGCACGCCGTTGCCGAGGACGATGGTGAAACCCTGCTCTATGTCGATCTGCACCTGCTGCACGAAGTGACGTCGCCGCAGGCCTTCGCCGCGCTCGAGGAGGCGGGGCGGGGGGTCCGCCGGCCCGAGCGGGCGCTCGCGCTGTCGGATCATAATGTCCCGACCGAAGGACAGGCCGCCGGGCCGGCCGGGGTTGCCGATGTCGAGGCGCGCGCGCAGCTCGAGGCGCTGGTCAGCAACACGGCGCGGCACGGCATCGAGAATTTCGCCATGGGCGACCCGCGCGGCGGCATCGTCCATGTCGTCGGCCCCGAACAGGGGCGCTCGCAGCCCGGCATGACGATCGTGTGCGGCGACAGCCACACATCGACGCACGGCGCGTTCGGCGCGCTCGCCTTCGGCATCGGCACCTCTGAAGTCGAACATGTGCTGGCGACGCAGACGATCCGGCAGCGCCGTTCGCGCAATATGCGGATCACCGTCGATGGCGTGCTGCGTCCGCATGTCCAGGCAAAGGATCTGGCGCTGCATCTGCTCGCGGCGATTGGCGTCGACGGGGCGACGGGGCATGTTATCGAATATGCGGGCAGCGCGATCGGGGCGCTGTCGATGGAAGCGCGGATGACGCTGTGCAATCTCAGCATCGAAATGGGCGCGCGCGCCGGACTGATCGCGCCCGACGACACGACATTCGCCTATCTCGCGGATCGGCCGGCGGTGCCGAAGGGCGATGCCTGGACCGCGGCGCTGGCGCGCTGGCGCGCCTTGCCGACCGACGCCGGGGCTGTCTTCGACCGCGAATTGCAGATCGATGCCGACGCGGTCGCGCCGATGGTCAGCTGGGGCACCAATCCGTCGCAGGTGATTGCGATCGACGGCGTCGTCCCCGATCCCGCTTGCCTGGCCGATCCCGACGCGCGCGCGGTTGCCGAGCGCGCGCTCGCCTATATGGGCCTGACGCCGGGCCGCCCGATCGCCGGGACGCCGATCGATCGCGTCTTCATCGGAAGCTGTACCAACAGCCGCATCGAAGATCTGCGCGTCGTCGCGGCGGTGGTCGAGGGACGCCGGGTCGCGGATCATGTGCGCGCCATGGTCGTGCCGGGGTCGGGGCTGGTCAAACGACAGGCTGAGGCGGAAGGGATCGACCGCATCCTGCGCGCAGCGGGCTTCGACTGGCGCGAGCCCGGCTGTTCGATGTGCGTCGGGATGAACGCGGACCGCCTTTTGCCTGGCGAACGCTGCGCGGCGACGTCGAACCGCAATTTCGAGAATCGGCAGGGGCGCGGCGGCCGCACCCATCTGATGAGCCCCGCGCTCGCGGCGGCGAGCGCGATTGCCGGTTGCATCGCCGATCCGGCGAGCCTGACGGGGAAAGAGCCGGGCTAG
PROTEIN sequence
Length: 476
MTGPRTLYDKIWDAHAVAEDDGETLLYVDLHLLHEVTSPQAFAALEEAGRGVRRPERALALSDHNVPTEGQAAGPAGVADVEARAQLEALVSNTARHGIENFAMGDPRGGIVHVVGPEQGRSQPGMTIVCGDSHTSTHGAFGALAFGIGTSEVEHVLATQTIRQRRSRNMRITVDGVLRPHVQAKDLALHLLAAIGVDGATGHVIEYAGSAIGALSMEARMTLCNLSIEMGARAGLIAPDDTTFAYLADRPAVPKGDAWTAALARWRALPTDAGAVFDRELQIDADAVAPMVSWGTNPSQVIAIDGVVPDPACLADPDARAVAERALAYMGLTPGRPIAGTPIDRVFIGSCTNSRIEDLRVVAAVVEGRRVADHVRAMVVPGSGLVKRQAEAEGIDRILRAAGFDWREPGCSMCVGMNADRLLPGERCAATSNRNFENRQGRGGRTHLMSPALAAASAIAGCIADPASLTGKEPG*