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SCNpilot_expt_500_bf_scaffold_555_curated_28

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: comp(37390..37968)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 192.0
  • Bit_score: 367
  • Evalue 1.10e-98
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 188.0
  • Bit_score: 222
  • Evalue 1.20e-55
Isopropylmalate isomerase small subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYP6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 192.0
  • Bit_score: 367
  • Evalue 7.60e-99

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGTTCGACCGGCTGACCGCCGTGGCGGCGCCGCTGCCGATCGCCAATGTCGATACCGACATGGTCATTCCGGCGCGCTTCATGAAGGCCCTGTCGCGCACCGGACTGGGGCGGCATCTGTTCCAGGAATTGCGCTACACGCCCGATGGCGGGGAGCGGGAGGATTTCGTCCTGAACCGCGGCGCAACCCGCGGCGCGCAGATATTGATCGCCGACCGCAATTTCGGCTGCGGCTCGTCGCGCGAACATGCGGTGTGGGCGCTCCGCGACTTCGGCATCCGCTGCGTGATCGCGCCGAGCTTCGGTGACATTTTTTCCAACAATGCACGCAAGAACGGGCTGCTCCTGATCCGGCTGCCCGCCGCAATCTGCGACCGGCTCCGCGACGAGGTCGCGCTGGCGCAATTCGCGCCGATGACCGTCGACCTTGCCGACCAGCGCCTCACGCTGGCGTCGGGCGAAAGCATCGAATTTGCCATCGACCCCGACGATCGCCGTACGCTTCTGGACGGACGCGACGACATCGCGCGCACCTTGCGGCACGAGGCTGCGATCGCCCGCTTCGAAACGGCGGCCTAG
PROTEIN sequence
Length: 193
MFDRLTAVAAPLPIANVDTDMVIPARFMKALSRTGLGRHLFQELRYTPDGGEREDFVLNRGATRGAQILIADRNFGCGSSREHAVWALRDFGIRCVIAPSFGDIFSNNARKNGLLLIRLPAAICDRLRDEVALAQFAPMTVDLADQRLTLASGESIEFAIDPDDRRTLLDGRDDIARTLRHEAAIARFETAA*