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SCNpilot_cont_300_bf_scaffold_190_curated_43

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(41040..41453)

Top 3 Functional Annotations

Value Algorithm Source
biopolymer transporter ExbD n=1 Tax=Variovorax paradoxus RepID=UPI0003617C96 similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 137.0
  • Bit_score: 265
  • Evalue 2.90e-68
biopolymer transport protein exbd/tolr; K03559 biopolymer transport protein ExbD similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 137.0
  • Bit_score: 264
  • Evalue 2.00e-68
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ADU36263.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 137.0
  • Bit_score: 264
  • Evalue 9.10e-68

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGGCTTTCGGAACCCAAGACGAACCCGACGAGGTGATGAACGAGATCAACATGACGCCGCTGGTCGACGTCATGCTGGTGCTCCTGATCATCTTCATCATCACCGTGCCGGTGATGAAACACGCGGTCAACATCGACCTGCCGCGCGCCACGAGCGAGCCGGAGCAGCCCAAGCCGCAGAACATCCTGTTCAGCGTCACGGCCGATGGCGAGTACTACTGGAACGAGCAGAAGATCGCCGACAGCGAACTCCCCGGCCGCCTGGCCGCCGAAGCCGCCAAGGAACCGCAGCCCGAGCTGCACATCCGCGGCGACAAGGCCGTGCGCTACGAGCGCGTGGCCAAGGCCATGTCCGAGGCTCGTGAAGCCGGCGTGCGCAAGATCGGCTTCATCACGGAACCCGATACGAAGTGA
PROTEIN sequence
Length: 138
MAFGTQDEPDEVMNEINMTPLVDVMLVLLIIFIITVPVMKHAVNIDLPRATSEPEQPKPQNILFSVTADGEYYWNEQKIADSELPGRLAAEAAKEPQPELHIRGDKAVRYERVAKAMSEAREAGVRKIGFITEPDTK*