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SCNpilot_cont_300_bf_scaffold_190_curated_44

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(41459..42172)

Top 3 Functional Annotations

Value Algorithm Source
ExbB n=1 Tax=Variovorax paradoxus RepID=UPI0003676825 similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 237.0
  • Bit_score: 467
  • Evalue 6.70e-129
Variovorax paradoxus strain MEDvA23 contig_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33583.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 238.0
  • Bit_score: 461
  • Evalue 8.80e-127
putative MotA/TolQ/ExbB proton channel similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 238.0
  • Bit_score: 456
  • Evalue 3.70e-126

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGGATTCCCAATTTGGCTTGATGAACGTCTGGAACCAAGGCGACTTCGTCACCAAGGCCGTGGCTGTGCTGCTGATCGGCATGTCGCTCGCGTCGTGGATCGTGATCATCGTCAAGGCACTCGACGTCATCCGCTACAAGCGCCTGGCCAAGCATTCGCAAGACTTCTGGCACAGCGAAGATTTCGCGACCGCCCTGAACAAGCTTGGCAAGGACGACAGCAACCCCTTCCGCGCGCTGGCCCTCGAAGGCCGCGAAGCCGCGGCGCACCACCGCAACACCAAGGCCCATCTGCATGACGCGCTGGACGTGAGCGACTGGATCACGCGCGCCCTGCGCAACGGCATCGACGCGTTCACCGCACGCCTGCAGACCGGCTTGGCCATCCTGGCGTCGGTCGGCTCGACCGCTCCCTTCATCGGCCTGTTCGGCACGGTCTGGGGCATCTACCACGCACTGATGAGCATCGGCTCGGCCGGCCAGGCGACCATCGACAAGGTGGCCGGCCCCATCGGTGAAGCACTGATCATGACGGCGCTGGGCCTGGCCGTGGCCATTCCCGCGGTGCTCGGCTACAACGCACTGGTGCGCGGCAACAAGTTCGTGCTGACCAAGCTGAATGCTTTCGCGCACGACCTGCACGCCTACTTCGTGACCGGCGCCCGCGTTCAGAGCGGTAGCGAAGCCATCGTGGTTCCGCTCAAGAAGGGCTGA
PROTEIN sequence
Length: 238
MDSQFGLMNVWNQGDFVTKAVAVLLIGMSLASWIVIIVKALDVIRYKRLAKHSQDFWHSEDFATALNKLGKDDSNPFRALALEGREAAAHHRNTKAHLHDALDVSDWITRALRNGIDAFTARLQTGLAILASVGSTAPFIGLFGTVWGIYHALMSIGSAGQATIDKVAGPIGEALIMTALGLAVAIPAVLGYNALVRGNKFVLTKLNAFAHDLHAYFVTGARVQSGSEAIVVPLKKG*