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SCNpilot_cont_300_bf_scaffold_53_curated_113

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 106830..107522

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator PhoB, winged helix family n=2 Tax=Variovorax RepID=E6UZI1_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 230.0
  • Bit_score: 456
  • Evalue 1.10e-125
winged helix family two component transcriptional regulator PhoB; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 230.0
  • Bit_score: 456
  • Evalue 3.60e-126
Two component transcriptional regulator PhoB, winged helix family {ECO:0000313|EMBL:ADU36694.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 230.0
  • Bit_score: 456
  • Evalue 1.60e-125

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGAAGAAACCCCGAGTCCTGATCGTCGAAGACGAGTCCTCGATCGCCGAGCTGATCGCCGTCAACCTGCGCCATAACGGCTTCGAGCCGATCTGGTCGGAAGATGGTGCCGCAGCCCAGCGCGAGATCGACGCCTTCCTGCCGGACCTGATCCTGCTCGACTGGATGCTGCCCGGCCAAAGCGGCCTGCAGCTCGCGCGCCAGTGGCGCAAGGACCCGCGCACCAAGGCCATCCCGATCCTGATGCTGACGGCGCGCGGCGACGAGCCAGACAAGGTCGCGGGCCTCGACGCCGGTGCCGACGACTACATCACCAAGCCTTTCTCTACCCAGGAAATGTTGGCCCGCATCCGCGCGGTGCTACGCCGCCGGGCGCCGGAAGTAGTGACGGAGCGCGTCGAAATCGGCGAACTGGCGCTCGACACCTCCACTCATCGCGTGACCTGGCAGGGCGGCGCCCTCAAGGTCGGCCCGACCGAATTCAAGCTGCTGGCTTACCTGATGCAGCATGCCGAGCGCGTGCACAGCCGGGCCCAGTTGCTCGACAAGGTGTGGGGCGACCATGTCTACATCGAGGAACGCACAGTCGATGTGCACGTCAAGCGCCTGCGTGAATCGCTGGGCGCGGCAGCGCCCATGGTGGAAACCGTGCGCGGAGCCGGCTACCGCCTGACCGCTCAAGTCACGGTTTGA
PROTEIN sequence
Length: 231
MKKPRVLIVEDESSIAELIAVNLRHNGFEPIWSEDGAAAQREIDAFLPDLILLDWMLPGQSGLQLARQWRKDPRTKAIPILMLTARGDEPDKVAGLDAGADDYITKPFSTQEMLARIRAVLRRRAPEVVTERVEIGELALDTSTHRVTWQGGALKVGPTEFKLLAYLMQHAERVHSRAQLLDKVWGDHVYIEERTVDVHVKRLRESLGAAAPMVETVRGAGYRLTAQVTV*