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SCNpilot_cont_300_bf_scaffold_53_curated_114

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 107567..108910

Top 3 Functional Annotations

Value Algorithm Source
pas/pac sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 445.0
  • Bit_score: 847
  • Evalue 2.40e-243
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 445.0
  • Bit_score: 847
  • Evalue 1.10e-242
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZI2_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 445.0
  • Bit_score: 847
  • Evalue 7.60e-243

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1344
ATGCCTTTCCGTATTGCTACATTTTTAATAGCGTCCCTTGCGATCGGAGCGGGCGCTGTTGCCGCTTTCGGCTGGAAATTCGGCTGGTTGGGTGCCTGGTTGGGCGCGGTGCTGTGGCTGGGATTCGATGCCTGGCGCGCACAGCGGCTGCTGCAGGTGCTTCGCAACGACGCAGTGGGCCTGCCGGCGCGTGGGCCGGGTGTGTGGGGCGAGTTGTCCGAGCGAATCCGCAAGCTGCTGCGAGACCGCGAGCAGCAGACCCGGCAGGCCGAAGACCGGCTGCAGGAGTTCCTGGCCGCCATCCAGGCATCGCCGAACGGCGTGGTGCTGCTCGACGAGCAAGGCCGCATCGAATGGTGCAACCAGACGGCAGCCAGCCAGTTCGGCATCGACGCGGAGCGCGACCTTGCGCAGCACCTGGCCAACCTGGTGCGAGACCCGGCTTTCGTTGCCTACCTCGCGTCGTGGAACTACAGCCGCGACGTCATCATCGACGCCTTCGGCCCGGGTCATGCGCACCAGCGCAGCCACCTCGTGCGGCTGTCGGTGCAGGTGCATCCTTATGCGGGCAACCGCCGCATGCTGCTGACGCGCGACATCACGGCGCTGGAGCAGGCGGAAGCCATGCGCCGCGATTTCGTGGCGAACGTGTCTCATGAGATCCGCACGCCGCTGACCGTGCTCGCGGGCTTTGTCGAAACGCTGCAGAACCTGCCGCTCGATGCGGACGAGCGCACGCGCTACCTGTCGCTGATGGGGCAGCAGTCGCACCGCATGGAAACGCTGGTGAACGACCTGCTGACGCTGTCGCGGCTGGAGGGCAGCGCGGCGCCTTCGGGCAACCAGTGGATCCGCATCCGGGCCCTGCTGGCGCATTGCGAGGATGAGGGCCGAGGACTGTCGGGCCGATTGGCACCGCTGGGCCACCGCCTTTCGTTCACCATCGATGCAGAGTCCGAGGTGTCGGGCGCGCCGACCGAACTGCAGAGCGCGATGTCGAACCTGCTGAGCAACGCCATCCGCTACACGCCCGGTGGCGGCGAGGTGGCCGTCAGCTGGCGGGTGCTGCCTGACGGGCGCGGTGAATATGCGGTGAAGGACACGGGCCCCGGCATCGCGGCTGAGCACATTCCCCGCCTGACCGAACGCTTCTACCGCATCGACCGCAGTCGTTCGCGCGAGACCGGTGGTACCGGGTTGGGCCTTGCCATCGTGAAGCACATCGCGCAACGCCACGGCGCCGAGTTGCGCATCGAAAGCACGGTGGGCAAGGGCTCTCGCTTCGCGCTGGTGTTCCCGGCTGCGCGTGTCCGGGAAGCGCGACTGCTGGCCAAGCAGCACTAA
PROTEIN sequence
Length: 448
MPFRIATFLIASLAIGAGAVAAFGWKFGWLGAWLGAVLWLGFDAWRAQRLLQVLRNDAVGLPARGPGVWGELSERIRKLLRDREQQTRQAEDRLQEFLAAIQASPNGVVLLDEQGRIEWCNQTAASQFGIDAERDLAQHLANLVRDPAFVAYLASWNYSRDVIIDAFGPGHAHQRSHLVRLSVQVHPYAGNRRMLLTRDITALEQAEAMRRDFVANVSHEIRTPLTVLAGFVETLQNLPLDADERTRYLSLMGQQSHRMETLVNDLLTLSRLEGSAAPSGNQWIRIRALLAHCEDEGRGLSGRLAPLGHRLSFTIDAESEVSGAPTELQSAMSNLLSNAIRYTPGGGEVAVSWRVLPDGRGEYAVKDTGPGIAAEHIPRLTERFYRIDRSRSRETGGTGLGLAIVKHIAQRHGAELRIESTVGKGSRFALVFPAARVREARLLAKQH*