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SCNpilot_cont_300_bf_scaffold_53_curated_115

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(108930..110282)

Top 3 Functional Annotations

Value Algorithm Source
MATE efflux family protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZI3_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 445.0
  • Bit_score: 748
  • Evalue 2.80e-213
Variovorax paradoxus strain MEDvA23 contig_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34310.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 446.0
  • Bit_score: 759
  • Evalue 2.30e-216
mate efflux family protein; K03327 multidrug resistance protein, MATE family similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 445.0
  • Bit_score: 748
  • Evalue 8.90e-214

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1353
GTGAGCGCACCCAGCGGCGAAAGGGGCCTGATCGCTCGGCACGCCGGCACCGTGCTGGTCGGCCAGTTGGCCGTGATGGCCTTCGGCGTGACCGACACCATCATCGCCGGCCGCTACTCCGAGGGCGCACTGGCCGCACTGTCGGTCGGCGCCGCGATTTTCGTCAGCGTGTACGTCTCGCTGATGGGTGTGCTGCAGGCGCTGCTGCCTGTGTGGGCTGAACTGCACGGCGCCGGGCGAAGCAACGAAGTGGGCCGCTCGGTGCGGCAATCGCTGTACCTCGCTGCCATTGCGATCGTGGTGGGCATGGCCGCGCTGCTGGCACCCGCCGCGGTGCTGCGGCTGACTCAGGTGCCCCCCGAAATGCGCGGCGACGTGGAGATGTACCTGCGCGTGCTGGCCTTCGCCTTGGCACCAGCCCTGCTCTTTCGCCTGTTCAGCACGCTGAACCAGAGCCTGGGCAAGCCGCAGCTCGTGACGTGGCTCCAGTTGGGCTCGCTGTTCGTGAAGCTGCCGCTTTCGATCTGGTTCACCTTCGGCGGTGCGGGCCTGCCCGCGATGGGGCTGGTGGGTTGCGGCTGGGCCACGCTGTGCGTGAACTGGGCCATGCTCGCCTGCGCGATCTGGTTGCTGCGCAGCAGTCCCTTCTATCGCGGCTATCGGTTGTGGGAACGCCTCGAGAAGCCCGACTGGCACCAGATCCGCCTGTTCGCCAAGCTGGGCGTGCCGGGAGGCCTGGCCGTGCTGGTCGAAGTGACTTCGTTCACGCTGATGGCGCTGTTCATCGCGCGCCTGGGCACTGCTGCGGCGGCGGCGCACCAGATCGCGGCGAACCTGATGGCGGTGGCATACATGGTGCCGCTGTCGCTCTCGATCGCGACCAGCGCGCGCGTGAGCTTCTGGCTCGGCGCCGGCGATGCCATGCGGGCGCGCCACGCATGCAGGCTGGGATTCGAGCAGACCGTGTTGTGCGCGCTGCTGTTCTCGACTGCGCTGGTCACCTTCCGCCATCCGTTGGCCAACGTGTATTCAGACAACCCCGCAGTGGTCGCCTTGGCAGCGTCGCTGATGCTGGCCGTGGCTGCCTATCACCTGGCCGACGCCATGCAAACGCTGTGCGTGTTCCTGCTGCGTTGCTACCGGGTCACGCTGGCGCCGCTGGTCATCTACTGCACGATGCTCTGGGGCCTGGGACTCGGCGGCAGCTACCTGCTTGCGTATCACGGCCTGGGGCCGTGGACAGCCATGCGATCGCCGCTGGCGTTCTGGATGATGAGTGCTGGCGCACTGGCGCTGACGGCCATGTTCTTCATCAGCCTGCTGCGCTGGACCATGAAGAAGCGCGCGGCCTGA
PROTEIN sequence
Length: 451
VSAPSGERGLIARHAGTVLVGQLAVMAFGVTDTIIAGRYSEGALAALSVGAAIFVSVYVSLMGVLQALLPVWAELHGAGRSNEVGRSVRQSLYLAAIAIVVGMAALLAPAAVLRLTQVPPEMRGDVEMYLRVLAFALAPALLFRLFSTLNQSLGKPQLVTWLQLGSLFVKLPLSIWFTFGGAGLPAMGLVGCGWATLCVNWAMLACAIWLLRSSPFYRGYRLWERLEKPDWHQIRLFAKLGVPGGLAVLVEVTSFTLMALFIARLGTAAAAAHQIAANLMAVAYMVPLSLSIATSARVSFWLGAGDAMRARHACRLGFEQTVLCALLFSTALVTFRHPLANVYSDNPAVVALAASLMLAVAAYHLADAMQTLCVFLLRCYRVTLAPLVIYCTMLWGLGLGGSYLLAYHGLGPWTAMRSPLAFWMMSAGALALTAMFFISLLRWTMKKRAA*