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SCNpilot_cont_300_bf_scaffold_53_curated_131

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 129278..130462

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J2KDH0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 390.0
  • Bit_score: 749
  • Evalue 1.90e-213
Putative membrane protein {ECO:0000313|EMBL:EJL71203.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 390.0
  • Bit_score: 749
  • Evalue 2.70e-213
ltrA; low temperature requirement A similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 386.0
  • Bit_score: 462
  • Evalue 1.90e-127

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
ATGAGCCACGACAACAAGCGGGCCACGACCTTGCGCTCGCGCAGCGAGGCGGCCAGGGTCTCGAACGAAGAGCTGTTCTTCGACCTGGTCTACGCGTTTTCCGTCACGCAACTGTCCCACTACCTGCTCGACCACCTCACGCTGCTGGGGGCGCTGCAGACGCTGGTGATGTGGTTCGCGGTATGGCTGGGCTGGCAGTACACCGCCTGGACCACCAACTGGTTCAACCCCGGCACCTTGCGCATCCGCGGCGTGTTGTTCGCCATCATGCTGCTGGCCATGGTGATGGCCTCGGCGCTGCCGGGCGCCTTCGCGGAGCGGGGGCTGGTGTTCGCGCTGTGCTTCGTGGGCATCCAGGCGGGGCGCACGCTGTGCATGCTGATCGCCATCGGCCCGAACGACCCGCTCACGCCCAACTTCCGCCGCCTGCTGGCCTGGAACTGCGTGGCCGGCGTGTTCTGGATCGCGGGCGGCTTCGCGCAAGGGGAGGCGCGCCTTGCGCTGTGGCTCGGCGGCGTGCTGTGCGAGTACATCGCGCCGATGATCGGCCTGCGCTTTCCGGGCCTGGGCCGTTCATTGACGAGCGACTGGACCATCGACGGCGGCCACCTGGCGGAGCGCTGCCAGCTGTTCGTGATCGTCGCGCTGGGCGAATCGGTGCTGGCCACCGGCATTGCCTTCGGGCACCACGCCGAATGGCACGGCCCTGACCTGTTCGCGCTGATGGTGGGCTTTTCTGGCAGCCTGGCGATGTGGTGGATGTACTTCGACACCAGCGCCAAGGAAGCGACCCACGCCATCGAGCATTCGACCGACCCCGGCGGCATCGGCGCCAAGTTCCACTACACGCACGTGATCCTGGTGGCGGGCATCATCGTGTGCGCGGTGGCGGATGAACTGACGATCAACGAAGGCTCGCACCACGCCGAGCTCAAGTACCTCGGCGCGCTGGTTGGCGGGCCGGCGCTTTACCTGTTCGGCAATGCGTTGTTCAAGCGCGTGGTGCGCGGCTTCCTGCCGCAGTCGCATCTCTACGGGCTGGGCCTGCTGGCTGTGCTCGCGTTTTTCGCGCCGCACCTGTCGGTGATCGTGGTGGGCACGCTCACGACGCTCGTCATGATCGCCGTGGCCGCGCTCGAAGCCGTGGTGCGCCGCAGGGCGTGGGCCGCTGAGCCCACGCACTGA
PROTEIN sequence
Length: 395
MSHDNKRATTLRSRSEAARVSNEELFFDLVYAFSVTQLSHYLLDHLTLLGALQTLVMWFAVWLGWQYTAWTTNWFNPGTLRIRGVLFAIMLLAMVMASALPGAFAERGLVFALCFVGIQAGRTLCMLIAIGPNDPLTPNFRRLLAWNCVAGVFWIAGGFAQGEARLALWLGGVLCEYIAPMIGLRFPGLGRSLTSDWTIDGGHLAERCQLFVIVALGESVLATGIAFGHHAEWHGPDLFALMVGFSGSLAMWWMYFDTSAKEATHAIEHSTDPGGIGAKFHYTHVILVAGIIVCAVADELTINEGSHHAELKYLGALVGGPALYLFGNALFKRVVRGFLPQSHLYGLGLLAVLAFFAPHLSVIVVGTLTTLVMIAVAALEAVVRRRAWAAEPTH*