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SCNpilot_cont_300_bf_scaffold_53_curated_132

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(130480..132072)

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 539.0
  • Bit_score: 934
  • Evalue 1.80e-269
Soluble lytic murein transglycosylase-like protein n=1 Tax=Variovorax sp. CF313 RepID=J3CGI2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 535.0
  • Bit_score: 972
  • Evalue 1.90e-280
Soluble lytic murein transglycosylase-like protein {ECO:0000313|EMBL:EJL71204.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 535.0
  • Bit_score: 972
  • Evalue 2.60e-280

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1593
ATGAAACTGATTGCTGCCACCTGCCTTGCAGGTTCACTGGTGCTCGCGGGCTGCGCGGGCACGAACAACAGCTCCGCACCGTCTTCCTCCTCCCCCAACGCCGGCGCCACTGCCGGCGGCAGCGCAAGCCCCGTCTACCCGCGCGACGCCCTCTCCCCCCTTGCCACCAGCCAGGCCCATTCGCAGAGCGTCGTCACGCTCGCCCCGCCGGCCGACATGTGGGACCGCATCCGCCGCGGCTTCAAGATGCCCAACCTGGACAACGACCTCGTGCGCGACCGCGAGCAGTGGTATGCCAGCCGGCCCGACTACATCCAGCGCATGACCGAGCGCTCGAACAAGTACATCTTCCACATCGTCGAGGAACTCGAGCGCCGCAACATGCCGACCGAGCTGGCGCTGCTGCCCTACATCGAGAGCGCGTTCAACCCGCAGGCCATCTCCAGCGCGCGCGCCGCGGGCATGTGGCAATTCATGCCGGCCACCGGCACCGACTTCGACCTCAAGCAGAACATCTTCCGCGACGATCGCCGCGACGTGGTGGCCTCCACCCGCGCCGCGCTCGACTACCTGCAGAAGCTCTACGGCATGTTCGGCGACTGGCAGCTGGCCCTGGCCGCCTACAACTGGGGCGAAGGCAGCGTGAGCCGTGCCATCGCCAAGAACCAGCGCCTGGGCCTGCCCACCACCTACAGCGACCTCACCATGCCCGCCGAGACGCGCATGTACGTGCCCAAGCTGCAGGCCGTGAAGAACATCGTGGCCAATCCGCAGGCGTTCAACACCGAGCTGCCGCTGATCGCCAACCACCCCTACTTCCAGACCGTCACGCTCACGCGCGACCTCGACGTCGAGCTTGCCGCCAAGCTGGCCGACGTTCGCCTCGAAGACTTCCGCGCGTTGAACCCGGCCGCGCACAAGCCCGTGCTCATTGCCGCCGGCACGCCGCAGATCCTGCTGCCGTGGGACAACGCGGCCGTGTTCCAGCGCAACTTCGACGCCTATTCGCAGGGCCAGTACGCCAGCTGGACCGCCTGGGTCGTGCCCAACACCATGACCGTGGCCGACGCGGCGCAACGCTCGGGCATGAGCGAAGCCGACCTGCGCGCCATCAACAACGTGCCGCCGCGCATGCTCATCAAGGCCGGCTCGACGCTGCTCGTGCCGCGCGGCGCCCGCGTGAAGGAAGACGTTGCGGCCGTGGTGGCCGACGACGGCCACCTGAGCTTCCAGCCCGAGATCGTCACCCGCCGCACCACCGTGAAGGCGGGCCGCGCCGACAGCGTGGCCACCATTGCACGCCGCTACAACCTCAAGCCCAACAACGTCGCCGAGTGGAACGACGTGAAGCCCAACCACGCGTTCAAGCGCGGCTACAGCGTGGTGGTGTACCTGCCGATCCGCGCGACCGTCGCGTCGCGCGTGGGCACCGGCATCCCGCCCGCGCGCGGCCATGCGGTGGCATCGTCGAAGCACGCGACGGCAAAGGCGGGAGCACCGCGCGGCGCCAACATCGCCAAGGTGCCCGCGAGCAGCAAGCAGCAGGTGGTGCGCGAGAAGCGCGGCGGCACGCCAGCCAAGAAGAAGCGCTGA
PROTEIN sequence
Length: 531
MKLIAATCLAGSLVLAGCAGTNNSSAPSSSSPNAGATAGGSASPVYPRDALSPLATSQAHSQSVVTLAPPADMWDRIRRGFKMPNLDNDLVRDREQWYASRPDYIQRMTERSNKYIFHIVEELERRNMPTELALLPYIESAFNPQAISSARAAGMWQFMPATGTDFDLKQNIFRDDRRDVVASTRAALDYLQKLYGMFGDWQLALAAYNWGEGSVSRAIAKNQRLGLPTTYSDLTMPAETRMYVPKLQAVKNIVANPQAFNTELPLIANHPYFQTVTLTRDLDVELAAKLADVRLEDFRALNPAAHKPVLIAAGTPQILLPWDNAAVFQRNFDAYSQGQYASWTAWVVPNTMTVADAAQRSGMSEADLRAINNVPPRMLIKAGSTLLVPRGARVKEDVAAVVADDGHLSFQPEIVTRRTTVKAGRADSVATIARRYNLKPNNVAEWNDVKPNHAFKRGYSVVVYLPIRATVASRVGTGIPPARGHAVASSKHATAKAGAPRGANIAKVPASSKQQVVREKRGGTPAKKKR*