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SCNpilot_cont_300_bf_scaffold_180_curated_77

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(80107..80868)

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase/reductase sdr; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 253.0
  • Bit_score: 467
  • Evalue 2.20e-129
Short-chain dehydrogenase/reductase SDR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V7T8_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 253.0
  • Bit_score: 467
  • Evalue 7.10e-129
Variovorax paradoxus strain MEDvA23 contig_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33664.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 253.0
  • Bit_score: 470
  • Evalue 1.20e-129

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGGAAGACCTCAAGGACAAGACCGCGCTCGTCACCGGCGCCAGCACGGGCATCGGCGCCGCGGTGGCCGTCGCGTTCGCGGCGCGCGGCATGCGCGTGGCGGTGCACTACAACAGCTCGGCCGCCGAGGCGCATCAGGTGGTCGAGACCATCCGCGCGGCCGGCGGCGCGGCGGTGGCCGTCAAGGCCGACGTGCGCGACACCGGCGCGATCCGCGACTGCGTGAAGCAGACGGTGGCCGAGTTCGGCCGCATCGACGTGCTGGTGAACAACGCGGGCAGTCTGGTCAAGCGCGTGCCCATCGCCGAGTTCGACGACGCGCTGTTCGACGAGGTGATGCACATCAACGCGCGCTCGGTGCTCGCCTTCTGCCGCGAGGTGGTGCCGCTGATGCGCACGCAGGGCGGCGGCAACATCATCAACGTGACCTCGGTCGCGGCGCGCACCGGCGGCGGGCCGGCCGCGTACCTGTACGCGGGCTCGAAGGGCTTCGTGAGCACGGCCACGCACGGCCTGGCAAAGGAGCTGGTGGGCGACCGCATCCGCGTGAATGCGGTGGCGCCGGGCGTCATTCAAACGCCCTTTCAAGACCGCTTCTCGACGCCCGCGATGCTCGAGAACTTCCGCGCCGGCATTCCCATGGGCCGCCTCGGCGAGCCCGAGGAATGCGTCGGCGCCTTTCTGTATCTGGCCTCCGAACAGCTCTCGGGCTATGTCACGGGGCAGGTGATCGAAGTGAACGGGGGGCAGTACATGCCCTGA
PROTEIN sequence
Length: 254
MEDLKDKTALVTGASTGIGAAVAVAFAARGMRVAVHYNSSAAEAHQVVETIRAAGGAAVAVKADVRDTGAIRDCVKQTVAEFGRIDVLVNNAGSLVKRVPIAEFDDALFDEVMHINARSVLAFCREVVPLMRTQGGGNIINVTSVAARTGGGPAAYLYAGSKGFVSTATHGLAKELVGDRIRVNAVAPGVIQTPFQDRFSTPAMLENFRAGIPMGRLGEPEECVGAFLYLASEQLSGYVTGQVIEVNGGQYMP*