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SCNpilot_cont_300_bf_scaffold_180_curated_78

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(80891..82471)

Top 3 Functional Annotations

Value Algorithm Source
galactarate dehydratase (EC:4.2.1.42); K01708 galactarate dehydratase [EC:4.2.1.42] similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 517.0
  • Bit_score: 963
  • Evalue 2.10e-278
Galactarate dehydratase n=1 Tax=Variovorax sp. CF313 RepID=J2KE67_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 527.0
  • Bit_score: 998
  • Evalue 3.10e-288
Galactarate dehydratase {ECO:0000313|EMBL:EJL71463.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 527.0
  • Bit_score: 998
  • Evalue 4.40e-288

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1581
ATGAGCAATGCCGCAGCCGGAGCCTCGCCGCTCTACATCCGCATCCACGCCAACGACAACGTGGCCATCGTCGCGAACGACGGCGGCCTGAAGGCCGGCACCGAGTTCGCCGACGGCCTCCGGCTGGTGGACAACGTGCCGCAGGGCCACAAGGTGGCGCTGTCGGACCTGGCCGAGGGCGCGGCCATCGTGCGCTACAACGTGGTGATCGGTTATGCGCAGAAGGCGCTGCCGCGCGGCAGCTGGGTGCACGAGCGGGTCATGCGCATGCCCGTCGCGCCCGAACTCGACGGCCTGCCCATCGCGACCGTCAAGGCCCCTGCCCTGCCGCCGCTGGAGGGCTACACCTTCGAGGGCTACCGCAACGCCGACGGCTCGGTGGGTTCGCGCAACATCCTCGCCATTACCGAGACGGTGCAGTGCGTGGCCGGCGTGATCGACTTTGCCGTGCAGCGCATCAAGGCCGAGCTGCTGCCCAGGTACCCGAACGTCGACGACGTGGTGGCACTCGCGCACGGCTATGGCTGCGGCGTGGCCATCGACGCGCCCGACGCCATCGTGCCGATCCGCACGCTGCGCAACATCAGCCTGAACCCGAACTTCGGCGGCGAAGTGATGGTGGTGAGCCTGGGCTGCGAGAAGCTGCAGCCCGAGCGCCTGCTGCCGCCGGGCAGCATCCCCATCGCCGACAAGCGCGGCGAGGCCGAGGGCGACGCCGAACTCGACGTGGTCTGCCTGCAGGACGACGCGCACGTCGGCTTCATGTCGATGATCGATTCGGTGATGCGGCAGGCCGAGCAGCACCTCGTGCGCCTGAACGCCCGCAAGCGCGAAACCGTGCCCGCCAGCGAACTGGTGGTGGGCGTGCAGTGCGGCGGCAGCGATGCCTTCTCGGGTGTCACCGCCAACCCTGCCGTGGGCTTTTGCACCGACCTGCTGGTGCGCGCGGGCGCGACGGTGATGTTCTCTGAAGTGACCGAGGTGCGCGACGGCATCGACCAGCTCACCTCGCGCGCGTCCTCGCCCGAAGTGGCCGAGGCCATGATCCGCGAGATGGCCTGGTACGACGCCTATCTGCAGAAGGGCCGCGTCGACCGCAGCGCCAACACCACGCCGGGCAACAAGAAAGGCGGCCTGTCGAACATCGTCGAGAAGGCGATGGGCTCCATCGTGAAGTCGGGCTCGGCGCCGATCACCGGCGTGCTGGCACCGGGCGAGAAGGTCGCGCAGAAGGGCCTGATCTACGCGGCCACGCCGGCCAGCGACTTCATCTGCGGCACGCTGCAGCTGGCGGCCGGCATCAACCTGCATGTGTTCACCACCGGCCGCGGCACGCCTTACGGGCTGGCCGAGGTGCCGGTGATCAAGGTCGCCACGCGCAGCGATCTCGCGCGCCGCTGGCACGACCTGATGGACGTGAACGCGGGCCGCATCGCCGACGGCGAAGCCAGCATCGAGGACGTAGGCTGGGAGCTGTTCCGCCTGATGCTCGACGTGGCCAGCGGCCGCAAGAAGACCTGGGCCGAGCACTGGAAGCTGCACAACGCGCTGGTGCTGTTCAACCCGGCCCCTGTCACCTGA
PROTEIN sequence
Length: 527
MSNAAAGASPLYIRIHANDNVAIVANDGGLKAGTEFADGLRLVDNVPQGHKVALSDLAEGAAIVRYNVVIGYAQKALPRGSWVHERVMRMPVAPELDGLPIATVKAPALPPLEGYTFEGYRNADGSVGSRNILAITETVQCVAGVIDFAVQRIKAELLPRYPNVDDVVALAHGYGCGVAIDAPDAIVPIRTLRNISLNPNFGGEVMVVSLGCEKLQPERLLPPGSIPIADKRGEAEGDAELDVVCLQDDAHVGFMSMIDSVMRQAEQHLVRLNARKRETVPASELVVGVQCGGSDAFSGVTANPAVGFCTDLLVRAGATVMFSEVTEVRDGIDQLTSRASSPEVAEAMIREMAWYDAYLQKGRVDRSANTTPGNKKGGLSNIVEKAMGSIVKSGSAPITGVLAPGEKVAQKGLIYAATPASDFICGTLQLAAGINLHVFTTGRGTPYGLAEVPVIKVATRSDLARRWHDLMDVNAGRIADGEASIEDVGWELFRLMLDVASGRKKTWAEHWKLHNALVLFNPAPVT*