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SCNpilot_cont_300_bf_scaffold_180_curated_84

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(87235..88029)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Herbaspirillum sp. CF444 RepID=J2U758_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 267.0
  • Bit_score: 426
  • Evalue 1.90e-116
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJL87012.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 267.0
  • Bit_score: 426
  • Evalue 2.70e-116
amino acid ABC transporter periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 263.0
  • Bit_score: 411
  • Evalue 2.60e-112

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Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGAAACTCGGCACCACCTTCACCCGCACATGCGTCGCGCTGGCCCTCGTGGCCGGCGTCGCGCAGGCCGCCATGGCCGACCAGCTCGACGACATCAAGAAGGCCGGCAAGGTGCGCGTGGCCATCGCCATGGGCACGCCGCTCTTCAGCTTTGCCGACGCCAACCTGCAGCCCACCGGCTCCGACGTGGACACCGCCACCGCGCTCGCAAAGGACCTGGGCGTGAAGCTGGAGATCGTGTCGATCACCAACGCAGCGCGCGTGCCCACGCTGCAGGCGCAGCGCGCCGACCTCGTGATCGCCGACCTGTCGATCACGCCCGAGCGCGAGAAGGTCGTCGATTTCTCCGTGCCCTACGCCGTCATCAGCATCATCGTGGGCGGCCCCAAGAGCATCAAGGTCACCGACTACGCCGACCTGAACGGCAAGCGCATCGGCCTGACGCGCGCCACCGTGAACGACACGCTCACCACGCAGCAGGCCAAGGGCGCGGAGATCGTGCGCTACGAAGACGACGCCACGCTCATCACCTCGATGGTCACCGGCCAGATCGACCTGTTCTCCAGCACGCCGTCGAACCTGAGCGAGATGGTCAAGCAGGCGCCGGCCAAGAACCTGGAGCTGAAGTTCGCGCAGAAGGACTTCGACCTGGGCATCGCGCTGAACAAGGAACAGCCCAAGCTCAAGGAATGGGTCAACAACTGGGTCGTGACCAACCAGAAGAACGGCAAGCTCAACGCCATCTACAAGAAGTACCACGGCCGCGACCTGCCCGAGCGCATCACGAAACTCTGA
PROTEIN sequence
Length: 265
MKLGTTFTRTCVALALVAGVAQAAMADQLDDIKKAGKVRVAIAMGTPLFSFADANLQPTGSDVDTATALAKDLGVKLEIVSITNAARVPTLQAQRADLVIADLSITPEREKVVDFSVPYAVISIIVGGPKSIKVTDYADLNGKRIGLTRATVNDTLTTQQAKGAEIVRYEDDATLITSMVTGQIDLFSSTPSNLSEMVKQAPAKNLELKFAQKDFDLGIALNKEQPKLKEWVNNWVVTNQKNGKLNAIYKKYHGRDLPERITKL*