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SCNpilot_cont_300_bf_scaffold_180_curated_85

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(88086..88814)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type polar amino acid transport system, ATPase component n=1 Tax=Herbaspirillum sp. CF444 RepID=J3D8W7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 241.0
  • Bit_score: 409
  • Evalue 2.20e-111
ABC-type polar amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL87011.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 241.0
  • Bit_score: 409
  • Evalue 3.10e-111
amino acid ABC transporter ATPase similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 242.0
  • Bit_score: 396
  • Evalue 4.60e-108

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Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGTCGCCAATCGTTAAGCTGGACCACGTCTATAAAAGCTTCGGGGCCAACCAGGTCCTGAAGGGCGTGTCTTTCGAAGTCGCCAAGGGCGAGATGATCGCGATCATCGGCGCCAGCGGCTCGGGCAAGAGCACGGCGCTGCGCTGCATCGACCGGCTCGAAGTGATCGACAAGGGCACCATCGAAGTCTGCGGCATCCGCGTCGACAGCCCCAGTGTCGACCTCAAGCAGCTGCGGCTCGAAGTGGGCATCGTGTTCCAGAGCTACAACCTGTTCCCCCACCTCACGGTGCAGGAGAACATCATGCTGGCGCTGCGCCACGTCAAGAAGCAGTCGCGCGGCGAAGCGCACGACGTTGCCCTGCGCGTGCTCGACCAGGTGGGCCTGAAGGAAAAGGCCGGCGCCTACCCCGAACAGCTCTCCGGCGGCCAGCAGCAGCGCGTGGCCATCGCGCGTTCGCTCGCGATGTCGCCCAAGGTGATGCTGTTCGACGAGGTCACCTCCGCGCTCGACCCCCAGCTCACCGGCGAAGTGCTGCGCGTGATGGAAGACCTCGCGGCCGGCGGCATGACCATGCTGCTCGTCACGCACGAGATGGCCTTCGCCAAGCGCGTGGCCGACCGGATCATCTACATGCACCAGGGCACCGTCTGGGAGACCGGCCCCGGCGAAATGCTCGACGCGCCCAAGACGCAGGAGTTGCGCGCCTTCCTGAACAACGGGCTGTAA
PROTEIN sequence
Length: 243
MSPIVKLDHVYKSFGANQVLKGVSFEVAKGEMIAIIGASGSGKSTALRCIDRLEVIDKGTIEVCGIRVDSPSVDLKQLRLEVGIVFQSYNLFPHLTVQENIMLALRHVKKQSRGEAHDVALRVLDQVGLKEKAGAYPEQLSGGQQQRVAIARSLAMSPKVMLFDEVTSALDPQLTGEVLRVMEDLAAGGMTMLLVTHEMAFAKRVADRIIYMHQGTVWETGPGEMLDAPKTQELRAFLNNGL*