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SCNpilot_cont_300_bf_scaffold_343_curated_32

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(51840..53393)

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion outer membrane protein, TolC family n=1 Tax=Variovorax sp. CF313 RepID=J2KG74_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 517.0
  • Bit_score: 911
  • Evalue 3.80e-262
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:EJL79190.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 517.0
  • Bit_score: 911
  • Evalue 5.30e-262
TolC family type I secretion outer membrane protein; K12340 outer membrane channel protein similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 518.0
  • Bit_score: 889
  • Evalue 4.90e-256

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1554
ATGCCTTCCAGGCCCCGGCTTTCGCCACTTTCCGCAGCGCTCGCAAGCACTTTCGCAGCACTGCTCGCATTGCCGGCCCAGGGCCAGACACTGAACGAACTGTATGACGCCGCCCGCAGCTACGACGCCACCTACCAGGGCGCGCGGGCCCAGTACGACGCCAACGTGGCGCGCGCCGCGCAGGCCAAGGCCGGCATCCTGCCGGCGGTCGGCCTCACGGCCGGCGTGACGCGCAGCGACATCGAGATCGACACCCTCACGGGCACCGGCCGCGGCACCACCACCCCGCGCGACTTCAACACGCAGAACGTCGGCATCAACGCCACGCAGCCGCTGTACCGGCCCGCCAACTGGGCCACCTACGAACAGGGCAAGCGCCAGGCCGACATCGCGCGAGCGGTGTTCACCATCGCGGAGCAGGACCTGATCGTGCGCGTGAGCCAGGCCTACTTCGACGTGCTCGCCAGCCAGGACAGCCTGGCGCTGGTGCGCGCGCAGAAGGTGGCCGTGGCCGAACAGCTGGCGTCGGCCAAGCGCAACTTCGAGGTCGGCACCTCGACCATCACCGATTCGCGCGAAGCGCAGGCCCGCTACGACCTGGTGACCGCGCAGGAAATCGCCGCCGAGAACGACCTGCAGGTCAAGAAGGTGGTGCTCGACCAGCTGGTCGGCCGCCCCGGTAGCGTTCCGGTGCCGCTCGCGGTGCCGGTGGTGCTGCCCACCGCCCTGCCCGCGGACATCAATGCCTGGGTCGCGCAGGCCGACGAGGTGCATCCGGCGATCCAGCAGGCGCGCCTGGGCGTCGACGTGGCCGGGCTCGAAGTGGAAAAGGCCAAGGCCGGCCACAAGCCCACGCTGGACGCCAACCTTGGCTACAACGTCACGCGCAATCCGACCGGCACCACCACCAGCGCGGTGGGCACGCGCGCCAATGCGACCACGGTCGGCGTCACCTTCAACCTGCCGCTGTTCGCCGGCTTCGCGACCGAGAACCGCATCAAGGAAACGCTGGCGCTCGAAGACCAGTCGCGCAGCGTGCTCGAAGGCACCCGCCGCAACGTGGCGCAGGCCACGCGCTCCGCGTACCTCGGGCTCGTCTCGGGTGCGGGTCAGGTGAAGGCGCTCGAAGCGGCCGAATCGTCGAGCCAGAGCGCGCTCGATGCCAACCGGCTCGGTTACCAGGTGGGCGTGCGCATCAACATCGACGTGCTGAACTCGCAGAGCCAGCTGTTCCAGACCAAGCGCGACCTCGCGCAGGCGCGCTACAACGTGCTGCTGGGCAACCTGAAGCTGCGCCAGGCCAACGGCACGCTGACCACCGACGACATGCACGCGATCAACGCCACGCTGGCAAGCAACGGCAGCGTGCCGGCCGTGCCCGCGGCCACCGCGCCGGACCGCACGCCGCAACAGCAACAGACGCCCGTGGTGCCGGTGACGCCGCCGAGCATCCCGGTGATTCCGCCGGTGCCGGTGCAGCCGTTCAATCCGCCCGCGCCGACGATGCCGACGCCGCCCGTGCCTCCGGTGATCCTGAATCCGCCGGTGCGCTGA
PROTEIN sequence
Length: 518
MPSRPRLSPLSAALASTFAALLALPAQGQTLNELYDAARSYDATYQGARAQYDANVARAAQAKAGILPAVGLTAGVTRSDIEIDTLTGTGRGTTTPRDFNTQNVGINATQPLYRPANWATYEQGKRQADIARAVFTIAEQDLIVRVSQAYFDVLASQDSLALVRAQKVAVAEQLASAKRNFEVGTSTITDSREAQARYDLVTAQEIAAENDLQVKKVVLDQLVGRPGSVPVPLAVPVVLPTALPADINAWVAQADEVHPAIQQARLGVDVAGLEVEKAKAGHKPTLDANLGYNVTRNPTGTTTSAVGTRANATTVGVTFNLPLFAGFATENRIKETLALEDQSRSVLEGTRRNVAQATRSAYLGLVSGAGQVKALEAAESSSQSALDANRLGYQVGVRINIDVLNSQSQLFQTKRDLAQARYNVLLGNLKLRQANGTLTTDDMHAINATLASNGSVPAVPAATAPDRTPQQQQTPVVPVTPPSIPVIPPVPVQPFNPPAPTMPTPPVPPVILNPPVR*