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SCNpilot_cont_300_bf_scaffold_343_curated_33

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(53415..53750)

Top 3 Functional Annotations

Value Algorithm Source
Rhodanese domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V951_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 111.0
  • Bit_score: 212
  • Evalue 2.40e-52
Variovorax paradoxus strain MEDvA23 contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26818.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 111.0
  • Bit_score: 214
  • Evalue 8.80e-53
rhodanese domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 111.0
  • Bit_score: 212
  • Evalue 7.50e-53

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGATCGACCAAGTCCGCCCCGCCGACCTCGCCGCCTGGTTCGCCCAGGACGCCGACGCGGCCCCGGTGCTGCTCGACGTGCGCGAGCCCTGGGAGCTGCAGACGGCGAGCGTCGTGCCCCAGGGCTTCACCCTGGTCGCGATCCCGATGAACGAGATCCCCGGGCGCCTGGCCGAGCTGGGCGAAGGCCGGCGCATCGCCTGCCTCTGCCACCACGGCGCGCGCAGCCAGCGCGTGGCCGCCTTCCTGAGCCAGAACGGCTTTGCCGACCTGGCCAACGTGGCCGGCGGCATCGACGCCTGGTCCTCGCACGACGCGTCTATCCCGCGCTACTGA
PROTEIN sequence
Length: 112
MIDQVRPADLAAWFAQDADAAPVLLDVREPWELQTASVVPQGFTLVAIPMNEIPGRLAELGEGRRIACLCHHGARSQRVAAFLSQNGFADLANVAGGIDAWSSHDASIPRY*