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SCNpilot_expt_1000_bf_scaffold_16245_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_16245_curated_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..276)
DNA (276bp) protein (92aa)
beta-mannosidase n=1 Tax=Rhizobium giardinii RepID=UPI00037286C7
beta-mannosidase; K01192 beta-mannosidase [EC:3.2.1.25]
Beta-mannosidase {ECO:0000313|EMBL:AHF84375.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
SCNpilot_expt_1000_bf_scaffold_16245_curated_2
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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518..1084
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AC32_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE58067.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_16245_curated_3
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1251..1496
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AJ88_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE55405.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
SCNpilot_expt_1000_bf_scaffold_16245_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1493..2320)
DNA (828bp) protein (276aa)
Transmembrane component of ABC transporter n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXK5_9RHIZ rbh
Transmembrane component of ABC transporter {ECO:0000313|EMBL:EYR80670.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transmembrane component of ABC transporter; K02026 multiple sugar transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_16245_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2263..3288)
DNA (1026bp) protein (342aa)
Sugar ABC transporter permease n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CNI3_9RHIZ rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:EYR80669.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_16245_curated_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3508..4743)
DNA (1236bp) protein (412aa)
Putative sugar ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AHK44614.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein rbh
Extracellular solute-binding protein family 1 n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B5ZSE1_RHILW rbh
SCNpilot_expt_1000_bf_scaffold_16245_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5182..6003
DNA (822bp) protein (274aa)
HTH-type transcriptional regulator AglR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQG9_9RHIZ rbh
Transcriptional regulator LacI family {ECO:0000313|EMBL:EYR80667.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
periplasmic binding protein/LacI transcriptional regulator; K02529 LacI family transcriptional regulator rbh
Displaying 7 items

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