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SCNpilot_expt_1000_bf_scaffold_4003_curated_19

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(17541..18344)

Top 3 Functional Annotations

Value Algorithm Source
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CK37_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 264.0
  • Bit_score: 432
  • Evalue 2.70e-118
  • rbh
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EYR83321.1}; EC=2.7.1.49 {ECO:0000313|EMBL:EYR83321.1};; EC=2.7.4.7 {ECO:0000313|EMBL:EYR83321.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 264.0
  • Bit_score: 432
  • Evalue 3.80e-118
thiD; putative phosphomethylpyrimidine kinase (EC:2.7.4.7); K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 264.0
  • Bit_score: 374
  • Evalue 2.10e-101
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGGCCATCGCAAATATTCTCTCGATCGCGGGCTCCGATCCGTCGGGCGGCGCCGGCATCCAGGCCGATCTCAAGACCTTCGCCGCCCGCGGCACCTACGGCATGGCCGTGCTGACCGCGCTGACGGCACAGAACACGCAAGGCGTCTCCGGCGTGCATCGCGTGCCGCCCGCCTTCGTCGCGGCGCAGATTGCGGATGTGTTCGGCGATATCCGTGTCGATGCCGTGAAGATCGGCATGATCGCCTCGGCGGAGATCGCCGGGGCGGTGGCGGATGCGCTTCTCCCCCATCGTGGCACGCCCGTCGTGCTCGATCCGGTCATGGTCGCCAAGGGCGGGGCTTCCTTGCTGGCCGAGGCGGCCGTCGCGGCGCTGGCCCGCCGCCTCCTGCCGCTCGCGACGGTGCTGACGCCGAACCTGCCGGAGGCGGCAGCGCTCCTCGGGGAGCCCGAGGCCGCCGACCGGGCCGCCATGGAAGGGCAGGCGACGCGCCTGCTTGCGCTCGGCCCGAAAGCGGTGCTGCTGAAGGGCGGGCACCTGCCGGGCGGCGAAAGCCCGGACGTGCTGGCGACGCCGGGCGGGCTGCGTTGGTACGAGGGCGTGCGGGTGCTGACGCGCAACACCCACGGCACCGGCTGCTCATTGTCGAGCGCCATCGCCGCCGAACTCGGCAAGGGCAGGCCGCTTGCCGATGCAGTCGCGGCGGCGAAGAGCTTCATCGCCGGCGCGGTGCGGTCTTCGGATGCGCTGTCGGTCGGCTCAGGCCACGGGCCGCTCCATCATTTCCATGCGCTCTGGACCTGA
PROTEIN sequence
Length: 268
MAIANILSIAGSDPSGGAGIQADLKTFAARGTYGMAVLTALTAQNTQGVSGVHRVPPAFVAAQIADVFGDIRVDAVKIGMIASAEIAGAVADALLPHRGTPVVLDPVMVAKGGASLLAEAAVAALARRLLPLATVLTPNLPEAAALLGEPEAADRAAMEGQATRLLALGPKAVLLKGGHLPGGESPDVLATPGGLRWYEGVRVLTRNTHGTGCSLSSAIAAELGKGRPLADAVAAAKSFIAGAVRSSDALSVGSGHGPLHHFHALWT*